RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 HCFC2Q9Y5Z7 792 aa18.68■□□□□ 0.58
CHMP4A-203ENST00000527154 LOXHD1Q8IVV2 1947 aa18.68■□□□□ 0.58
CHMP4A-203ENST00000527154 MAFGO15525 162 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 SP100P23497 879 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 TMEM62Q0P6H9 643 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 CCDC105Q8IYK2 499 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 TMEM40Q8WWA1 233 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 RMDN1Q96DB5 314 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 RNF19AQ9NV58 838 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 TMEM161AQ9NX61 479 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 KMT2BQ9UMN6 2715 aaPredicted RBP18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 FRYLO94915 3013 aa18.67■□□□□ 0.58
CHMP4A-203ENST00000527154 PDE4AP27815 886 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 IGBP1P78318 339 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 KRT76Q01546 638 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 DSC3Q14574 896 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 PLCB4Q15147 1175 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 TMEM266Q2M3C6 531 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 LRRC55Q6ZSA7 311 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 PLPPR4Q7Z2D5 763 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 ADAM2Q99965 735 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 APOL5Q9BWW9 433 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 SEMA4AQ9H3S1 761 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 PUF60Q9UHX1 559 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 NOC2LQ9Y3T9 749 aaKnown RBP18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 ZFHX4Q86UP3 3567 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 OTOGLQ3ZCN5 2332 aa18.66■□□□□ 0.58
CHMP4A-203ENST00000527154 ASGR2P07307 311 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 ARP10275 920 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 MTHFRP42898 656 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 KIAA1841Q6NSI8 718 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 CES5AQ6NT32 575 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 LLGL2Q6P1M3 1020 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 MTHFD1LQ6UB35 978 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 PLCD3Q8N3E9 789 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 MRPL43Q8N983 215 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 SPZ1Q9BXG8 430 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 TMEM117Q9H0C3 514 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 CDHR5Q9HBB8 845 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 CEP250Q9BV73 2442 aa18.65■□□□□ 0.58
CHMP4A-203ENST00000527154 C2orf71A6NGG8 1288 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 PI15O43692 258 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 SMARCA1P28370 1054 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 PPM1AP35813 382 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 MTMR1Q13613 665 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 ANGPT1Q15389 498 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 KCNT2Q6UVM3 1135 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 SMARCC2Q8TAQ2 1214 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 TRAPPC12Q8WVT3 735 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 CASD1Q96PB1 797 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 OSBPL3Q9H4L5 887 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 JADE2Q9NQC1 790 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 ENTPD7Q9NQZ7 604 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 TSHZ2Q9NRE2 1034 aa18.64■□□□□ 0.57
CHMP4A-203ENST00000527154 TPRP12270 2363 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 IGKV6D-21A0A0A0MT36 114 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 CLASP2O75122 1294 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 RPS6KA5O75582 802 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 ATG7O95352 703 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 FGFR1P11362 822 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 NFX1Q12986 1120 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 SPOUT1Q5T280 376 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 KIAA0319LQ8IZA0 1049 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 MAP3K14Q99558 947 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 JPH1Q9HDC5 661 aaPredicted RBP18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
CHMP4A-203ENST00000527154 EOMESO95936 686 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 SLC26A2P50443 739 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 ODR4Q5SWX8 454 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 CWC27Q6UX04 472 aaKnown RBP18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 DTWD2Q8NBA8 298 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 CUL5Q93034 780 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 RILPL2Q969X0 211 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 RTP3Q9BQQ7 232 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 ATP6V0A4Q9HBG4 840 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 DLL3Q9NYJ7 618 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 SLC9A2Q9UBY0 812 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 IRAK3Q9Y616 596 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 NFASCO94856 1347 aa18.62■□□□□ 0.57
CHMP4A-203ENST00000527154 DENND3A2RUS2 1198 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 GPR182O15218 404 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 FAM228AQ86W67 206 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 MFSD1Q9H3U5 465 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 AZI2Q9H6S1 392 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 LIMD1Q9UGP4 676 aa18.61■□□□□ 0.57
CHMP4A-203ENST00000527154 ZBTB42B2RXF5 422 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 LMNAP02545 664 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 KLRC1P26715 233 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 STAT5BP51692 787 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 ACTR2P61160 394 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 KRT17Q04695 432 aa18.6■□□□□ 0.57
CHMP4A-203ENST00000527154 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms