RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 LRRC27Q9C0I9 530 aa16.02■□□□□ 0.16
COLCA2-202ENST00000526216 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
COLCA2-202ENST00000526216 PPP1R3GB7ZBB8 358 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 HAX1O00165 279 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
COLCA2-202ENST00000526216 DKC1O60832 514 aaKnown RBP eCLIP16.01■□□□□ 0.15
COLCA2-202ENST00000526216 GNRH1P01148 92 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 HOXD10P28358 340 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 CCND3P30281 292 aaPredicted RBP16.01■□□□□ 0.15
COLCA2-202ENST00000526216 COASYQ13057 564 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 MAP3K21Q5TCX8 1036 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 PLPPR4Q7Z2D5 763 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 TLK2Q86UE8 772 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 TRMT44Q8IYL2 757 aaKnown RBP16.01■□□□□ 0.15
COLCA2-202ENST00000526216 KIAA0895Q8NCT3 520 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 GLIS3Q8NEA6 775 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 MED15Q96RN5 788 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 CBX8Q9HC52 389 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 SEPT9Q9UHD8 586 aaPredicted RBP16.01■□□□□ 0.15
COLCA2-202ENST00000526216 PCDHA2Q9Y5H9 948 aa16.01■□□□□ 0.15
COLCA2-202ENST00000526216 A6NJR5 290 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 USO1O60763 962 aaKnown RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 ZNF286BP0CG31 522 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 PRKAR2AP13861 404 aaKnown RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 AKR1A1P14550 325 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 IDEP14735 1019 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 GUCY2CP25092 1073 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 MARK3P27448 753 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 STK4Q13043 487 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 IQCB1Q15051 598 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 TARBP2Q15633 366 aaKnown RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 ZNF658Q5TYW1 1059 aaPredicted RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 RNF214Q8ND24 703 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 C16orf70Q9BSU1 422 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 NIFKQ9BYG3 293 aaKnown RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 XPNPEP1Q9NQW7 623 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 PDLIM7Q9NR12 457 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 PANK4Q9NVE7 773 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 RMND1Q9NWS8 449 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
COLCA2-202ENST00000526216 PCNTO95613 3336 aa16■□□□□ 0.15
COLCA2-202ENST00000526216 MYADML2A6NDP7 307 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 ZBTB42B2RXF5 422 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 HMGCRP04035 888 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 KRT18P05783 430 aaKnown RBP15.99■□□□□ 0.15
COLCA2-202ENST00000526216 ZNF131P52739 623 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 MTERF2Q49AM1 385 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 RAET1EQ8TD07 263 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 PXYLP1Q8TE99 480 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 ATP8B4Q8TF62 1192 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 GLG1Q92896 1179 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 CEP170P1Q96L14 293 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 SMARCAD1Q9H4L7 1026 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 AZI2Q9H6S1 392 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 Q9Y3F1 56 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 TRIM17Q9Y577 477 aa15.99■□□□□ 0.15
COLCA2-202ENST00000526216 SFI1A8K8P3 1242 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 SEPT4O43236 478 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 HIP1RO75146 1068 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 DUSP11O75319 330 aaKnown RBP15.98■□□□□ 0.15
COLCA2-202ENST00000526216 PRCPP42785 496 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 SOX10P56693 466 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 BEX3Q00994 111 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 OTUD6AQ7L8S5 288 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 SFR1Q86XK3 245 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 DHX40Q8IX18 779 aaKnown RBP15.98■□□□□ 0.15
COLCA2-202ENST00000526216 CCDC65Q8IXS2 484 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 FAM200AQ8TCP9 573 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 FIZ1Q96SL8 496 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 BEGAINQ9BUH8 593 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 UPF3AQ9H1J1 476 aaKnown RBP15.98■□□□□ 0.15
COLCA2-202ENST00000526216 RNPEPQ9H4A4 650 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 GPRC5CQ9NQ84 441 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 HTTP42858 3142 aa15.98■□□□□ 0.15
COLCA2-202ENST00000526216 PPFIA4O75335 1185 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 ZNF165P49910 485 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 PRMT2P55345 433 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 GJA9P57773 515 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 NCAPHQ15003 741 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 FAM26FQ5R3K3 315 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 MAEAQ7L5Y9 396 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 LUZP1Q86V48 1076 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 ADSSL1Q8N142 457 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 AOPEPQ8N6M6 819 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 BBXQ8WY36 941 aaPredicted RBP15.97■□□□□ 0.15
COLCA2-202ENST00000526216 KAT2BQ92831 832 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 FAM167AQ96KS9 214 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
COLCA2-202ENST00000526216 DHX33Q9H6R0 707 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms