RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 PHOX2BQ99453 314 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 ADAM2Q99965 735 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 ZNF318Q5VUA4 2279 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 TECTAO75443 2155 aa16.26■□□□□ 0.19
VARS-228ENST00000495010 HBP1O60381 514 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 ZNF76P36508 570 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 NAPAP54920 295 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 DUSP6Q16828 381 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 IRF2BPLQ9H1B7 796 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 ATP6V0A4Q9HBG4 840 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 RGS18Q9NS28 235 aa16.25■□□□□ 0.19
VARS-228ENST00000495010 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
VARS-228ENST00000495010 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
VARS-228ENST00000495010 LOXHD1Q8IVV2 1947 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 DDX39AO00148 427 aaKnown RBP16.24■□□□□ 0.19
VARS-228ENST00000495010 ST18O60284 1047 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 FOSP01100 380 aaPredicted RBP16.24■□□□□ 0.19
VARS-228ENST00000495010 ARP10275 920 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 LIFRP42702 1097 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 CEP55Q53EZ4 464 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 FAM102BQ5T8I3 360 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 COLGALT1Q8NBJ5 622 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 CYP2W1Q8TAV3 490 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
VARS-228ENST00000495010 ERVK-5Q9HDB9 667 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
VARS-228ENST00000495010 ST3GAL5Q9UNP4 418 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 PLXNA4Q9HCM2 1894 aa16.24■□□□□ 0.19
VARS-228ENST00000495010 MGEA5O60502 916 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 LAG3P18627 525 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 TECP42680 631 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ADCY7P51828 1080 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ERVFC1P60507 584 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
VARS-228ENST00000495010 ZNF484Q5JVG2 852 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 PLPP4Q5VZY2 271 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 CKAP2LQ8IYA6 745 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ATP8B4Q8TF62 1192 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 PGBD1Q96JS3 809 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 RIC8AQ9NPQ8 531 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ENTPD7Q9NQZ7 604 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ZNF302Q9NR11 478 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 COL1A2P08123 1366 aa16.23■□□□□ 0.19
VARS-228ENST00000495010 ATG7O95352 703 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 TCF15Q12870 199 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
VARS-228ENST00000495010 PTPN21Q16825 1174 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 WWC2Q6AWC2 1192 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 LLGL2Q6P1M3 1020 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 PDXDC2PQ6P474 469 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 KIAA0319LQ8IZA0 1049 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 SUSD6Q92537 303 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
VARS-228ENST00000495010 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 ANO3Q9BYT9 981 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 CDHR5Q9HBB8 845 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
VARS-228ENST00000495010 TMEM161AQ9NX61 479 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
VARS-228ENST00000495010 C9IYK1 514 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 FSCN2O14926 492 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 HOXA2O43364 376 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 FGFR1P11362 822 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 AVPR2P30518 371 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
VARS-228ENST00000495010 KRT17Q04695 432 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 ANKRD54Q6NXT1 300 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 PPP1R18Q6NYC8 613 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 ABHD15Q6UXT9 468 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 ABI1Q8IZP0 508 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 METTL13Q8N6R0 699 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 VN1R2Q8NFZ6 395 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 TMEM40Q8WWA1 233 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 MRPS27Q92552 414 aaKnown RBP16.21■□□□□ 0.19
VARS-228ENST00000495010 OSMRQ99650 979 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 TCF25Q9BQ70 676 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 APOL5Q9BWW9 433 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 LRRC2Q9BYS8 371 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 GLT8D2Q9H1C3 349 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 ELAC1Q9H777 363 aaKnown RBP16.21■□□□□ 0.19
VARS-228ENST00000495010 NGRNQ9NPE2 291 aaKnown RBP16.21■□□□□ 0.19
VARS-228ENST00000495010 TCEAL9Q9UHQ7 104 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 NR2E1Q9Y466 385 aa16.21■□□□□ 0.19
VARS-228ENST00000495010 IGKV6D-21A0A0A0MT36 114 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 SMCO2A6NFE2 343 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 MEIS1O00470 390 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 SLC27A2O14975 620 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 GFRA3O60609 400 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 SP100P23497 879 aaPredicted RBP16.2■□□□□ 0.18
VARS-228ENST00000495010 PLCB3Q01970 1234 aa16.2■□□□□ 0.18
VARS-228ENST00000495010 AP3B2Q13367 1082 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms