RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NME8Q8N427 588 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 SCLYQ96I15 445 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 PRO3102Q9H379 93 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 WRAP73Q9P2S5 460 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 CLIC4Q9Y696 253 aa12.12□□□□□ -0.47
ATG4B-219ENST00000479941 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
ATG4B-219ENST00000479941 WDR81Q562E7 1941 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 MED24O75448 989 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 BRD1O95696 1058 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 PFKMP08237 780 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 SPATA31C1P0DKV0 1188 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
ATG4B-219ENST00000479941 TMOD1P28289 359 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 PKP1Q13835 747 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 IL17AQ16552 155 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 ZNF618Q5T7W0 954 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 IER5Q5VY09 327 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 DNAJB3Q8WWF6 145 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 CEP170P1Q96L14 293 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 AK8Q96MA6 479 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 USP28Q96RU2 1077 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 JPH2Q9BR39 696 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-219ENST00000479941 FAM49AQ9H0Q0 323 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-219ENST00000479941 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 CYP26B1Q9NR63 512 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 ANKEF1Q9NU02 776 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 PCDH10Q9P2E7 1040 aa12.11□□□□□ -0.47
ATG4B-219ENST00000479941 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-219ENST00000479941 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 A0A1W2PPC1 479 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 M0QZ92 97 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 CTSHP09668 335 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 LONP1P36776 959 aaKnown RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 ANP32AP39687 249 aaKnown RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 CCT6AP40227 531 aaKnown RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 CEBPZQ03701 1054 aaKnown RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 SLC39A14Q15043 492 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 PTPAQ15257 358 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 FAM26DQ5JW98 314 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 ATL3Q6DD88 541 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 EFCAB12Q6NXP0 572 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 PSRC1Q6PGN9 363 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 ZBTB10Q96DT7 871 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 CEP89Q96ST8 783 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 FTOQ9C0B1 505 aaKnown RBP eCLIP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 DAXXQ9UER7 740 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
ATG4B-219ENST00000479941 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
ATG4B-219ENST00000479941 TMEM150BA6NC51 233 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 ZBTB39O15060 712 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 CXCL10P02778 98 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 RFC5P40937 340 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 DNM2P50570 870 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 EPHB4P54760 987 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 NPEPPSP55786 919 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
ATG4B-219ENST00000479941 CDC42EP1Q00587 391 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 XKR9Q5GH70 373 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 TDHQ8IZJ6 230 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 LINC01465Q8N7H1 131 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 MAP7D2Q96T17 732 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 SUGCTQ9HAC7 445 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 DBR1Q9UK59 544 aaKnown RBP12.09□□□□□ -0.47
ATG4B-219ENST00000479941 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
ATG4B-219ENST00000479941 KDM3AQ9Y4C1 1321 aa12.09□□□□□ -0.47
ATG4B-219ENST00000479941 PP2D1A8MPX8 630 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 SLC26A4O43511 780 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 GAS2O43903 313 aaKnown RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 NBNO60934 754 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 DGAT1O75907 488 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 YEATS4O95619 227 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 FGBP02675 491 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 CHRNA1P02708 482 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 ACRP10323 421 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 ACTN1P12814 892 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-219ENST00000479941 CDC25AP30304 524 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 UBA7P41226 1012 aa12.08□□□□□ -0.48
ATG4B-219ENST00000479941 RARRES1P49788 294 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms