RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 RPLP2P05387 115 aaKnown RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 TXKP42681 527 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 DEFB103AP81534 67 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 MGAT3Q09327 533 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 ZNF174Q15697 407 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 MCTP1Q6DN14 999 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 B3GNT9Q6UX72 402 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 TMCO2Q7Z6W1 182 aaPredicted RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 NME8Q8N427 588 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 ARID2Q68CP9 1835 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 TTC3P53804 2025 aa13.03□□□□□ -0.32
BRD9-203ENST00000475706 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
BRD9-203ENST00000475706 ZBTB42B2RXF5 422 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 H3BQV1 296 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 MAGEB2O15479 319 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 DKC1O60832 514 aaKnown RBP eCLIP13.02□□□□□ -0.339e-9■■■■■ 51.4
BRD9-203ENST00000475706 C22orf31O95567 290 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 AMHP03971 560 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 PSMC5P62195 406 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 LPIN1Q14693 890 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 EPHA7Q15375 998 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 XKR3Q5GH77 459 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 FBXO47Q5MNV8 452 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 EFCAB12Q6NXP0 572 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.02□□□□□ -0.33
BRD9-203ENST00000475706 HERC6Q8IVU3 1022 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 KIAA0319LQ8IZA0 1049 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 MYOCDQ8IZQ8 938 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 APBB2Q92870 758 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
BRD9-203ENST00000475706 CELF4Q9BZC1 486 aaKnown RBP13.02□□□□□ -0.33
BRD9-203ENST00000475706 SUGCTQ9HAC7 445 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 SLC28A3Q9HAS3 691 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 PCDHA12Q9UN75 941 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.02□□□□□ -0.33
BRD9-203ENST00000475706 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
BRD9-203ENST00000475706 TMEM265A0A087WTH1 108 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 TLL1O43897 1013 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 UPP2O95045 317 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 VTNP04004 478 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 P4HBP07237 508 aaKnown RBP13.01□□□□□ -0.33
BRD9-203ENST00000475706 TMOD1P28289 359 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 CD52P31358 61 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 QARSP47897 775 aaKnown RBP13.01□□□□□ -0.33
BRD9-203ENST00000475706 CLCN3P51790 818 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 TBC1D8BQ0IIM8 1120 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 CTTNQ14247 550 aaKnown RBP13.01□□□□□ -0.33
BRD9-203ENST00000475706 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 PPP2R2DQ66LE6 453 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 NOSTRINQ8IVI9 506 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 MYLIPQ8WY64 445 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 DYDC2Q96IM9 177 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 GUCD1Q96NT3 240 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 MAP7D2Q96T17 732 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 CDX2Q99626 313 aaPredicted RBP13.01□□□□□ -0.33
BRD9-203ENST00000475706 TMEM60Q9H2L4 133 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 TTC12Q9H892 705 aaPredicted RBP13.01□□□□□ -0.33
BRD9-203ENST00000475706 RGL1Q9NZL6 768 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 AKT3Q9Y243 479 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 NLRC5Q86WI3 1866 aa13.01□□□□□ -0.33
BRD9-203ENST00000475706 STBD1O95210 358 aa13□□□□□ -0.33
BRD9-203ENST00000475706 CA3P07451 260 aa13□□□□□ -0.33
BRD9-203ENST00000475706 CYP4A11Q02928 519 aa13□□□□□ -0.33
BRD9-203ENST00000475706 NFX1Q12986 1120 aaKnown RBP13□□□□□ -0.33
BRD9-203ENST00000475706 GRIN2CQ14957 1233 aa13□□□□□ -0.33
BRD9-203ENST00000475706 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
BRD9-203ENST00000475706 PLA2G4FQ68DD2 849 aa13□□□□□ -0.33
BRD9-203ENST00000475706 TPH2Q8IWU9 490 aa13□□□□□ -0.33
BRD9-203ENST00000475706 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
BRD9-203ENST00000475706 LXNQ9BS40 222 aa13□□□□□ -0.33
BRD9-203ENST00000475706 NIFKQ9BYG3 293 aaKnown RBP13□□□□□ -0.33
BRD9-203ENST00000475706 AGO3Q9H9G7 860 aaKnown RBP13□□□□□ -0.33
BRD9-203ENST00000475706 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
BRD9-203ENST00000475706 KDM3AQ9Y4C1 1321 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 RPS6KA5O75582 802 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 IBSPP21815 317 aaPredicted RBP12.99□□□□□ -0.33
BRD9-203ENST00000475706 U2AF2P26368 475 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRD9-203ENST00000475706 NLRP11P59045 1033 aaKnown RBP12.99□□□□□ -0.33
BRD9-203ENST00000475706 SPIRE1Q08AE8 756 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 PAK2Q13177 524 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 NBR1Q14596 966 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 TARBP2Q15633 366 aaKnown RBP12.99□□□□□ -0.33
BRD9-203ENST00000475706 KIZQ2M2Z5 673 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 ANO5Q75V66 913 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 USP38Q8NB14 1042 aa12.99□□□□□ -0.33
BRD9-203ENST00000475706 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms