RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 FBXO47Q5MNV8 452 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 MYOCDQ8IZQ8 938 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 NME8Q8N427 588 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 METTL13Q8N6R0 699 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 VAV3Q9UKW4 847 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 WDR81Q562E7 1941 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 MICAL3Q7RTP6 2002 aa27.04■■□□□ 1.92
CPNE1-223ENST00000475146 BAG4O95429 457 aaKnown RBP27.03■■□□□ 1.92
CPNE1-223ENST00000475146 FOSL2P15408 326 aa27.03■■□□□ 1.92
CPNE1-223ENST00000475146 PPP2R5CQ13362 524 aa27.03■■□□□ 1.92
CPNE1-223ENST00000475146 FAM117BQ6P1L5 589 aa27.03■■□□□ 1.92
CPNE1-223ENST00000475146 TSHZ1Q6ZSZ6 1077 aa27.03■■□□□ 1.92
CPNE1-223ENST00000475146 HAS1Q92839 578 aa27.03■■□□□ 1.92
CPNE1-223ENST00000475146 EML1O00423 815 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 CD2BP2O95400 341 aaKnown RBP27.02■■□□□ 1.92
CPNE1-223ENST00000475146 MKRN4PQ13434 485 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-223ENST00000475146 SLFN12Q8IYM2 578 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 KIAA0319LQ8IZA0 1049 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 BANK1Q8NDB2 785 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 CELF4Q9BZC1 486 aaKnown RBP27.02■■□□□ 1.92
CPNE1-223ENST00000475146 PRDM12Q9H4Q4 367 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 SEPT9Q9UHD8 586 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-223ENST00000475146 GINS2Q9Y248 185 aa27.02■■□□□ 1.92
CPNE1-223ENST00000475146 MAGEB2O15479 319 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 GJB5O95377 273 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 ATP2B1P20020 1258 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 GNL2Q13823 731 aaKnown RBP27.01■■□□□ 1.91
CPNE1-223ENST00000475146 CALCRLQ16602 461 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 FBXO18Q8NFZ0 1043 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 TMX3Q96JJ7 454 aa27.01■■□□□ 1.91
CPNE1-223ENST00000475146 WNT7AO00755 349 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 NEMFO60524 1076 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 CD52P31358 61 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 MCM2P49736 904 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 XKR3Q5GH77 459 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 NCAPH2Q6IBW4 605 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 PPP1R16BQ96T49 567 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 AGO3Q9H9G7 860 aaKnown RBP27■■□□□ 1.91
CPNE1-223ENST00000475146 GTF3C3Q9Y5Q9 886 aa27■■□□□ 1.91
CPNE1-223ENST00000475146 KDM3AQ9Y4C1 1321 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 CLCN3P51790 818 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 PSMC5P62195 406 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 MTERF2Q49AM1 385 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 USP38Q8NB14 1042 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 GAS2L1Q99501 681 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-223ENST00000475146 FOXP1Q9H334 677 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-223ENST00000475146 KIF3AQ9Y496 699 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 SQORQ9Y6N5 450 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 EVPLQ92817 2033 aa26.99■■□□□ 1.91
CPNE1-223ENST00000475146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-223ENST00000475146 LCHNA4D1U4 455 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 TMEM150BA6NC51 233 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 TMOD1P28289 359 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 TBC1D8BQ0IIM8 1120 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 PAK2Q13177 524 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 EFCAB12Q6NXP0 572 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 LRRC71Q8N4P6 559 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 MAP7D2Q96T17 732 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 RAD9AQ99638 391 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 AKT3Q9Y243 479 aa26.98■■□□□ 1.91
CPNE1-223ENST00000475146 DDX11L8A8MPP1 907 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 DKC1O60832 514 aaKnown RBP eCLIP26.97■■□□□ 1.91
CPNE1-223ENST00000475146 ARHGEF15O94989 841 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 UPP2O95045 317 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 VTNP04004 478 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 MCM7P33993 719 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 QARSP47897 775 aaKnown RBP26.97■■□□□ 1.91
CPNE1-223ENST00000475146 TAP1Q03518 808 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 BACH2Q9BYV9 841 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 CERS4Q9HA82 394 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 SUGCTQ9HAC7 445 aa26.97■■□□□ 1.91
CPNE1-223ENST00000475146 EPHA7Q15375 998 aa26.96■■□□□ 1.91
CPNE1-223ENST00000475146 KIZQ2M2Z5 673 aa26.96■■□□□ 1.91
CPNE1-223ENST00000475146 MAFAQ8NHW3 353 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-223ENST00000475146 SH2D3AQ9BRG2 576 aa26.96■■□□□ 1.91
CPNE1-223ENST00000475146 NIFKQ9BYG3 293 aaKnown RBP26.96■■□□□ 1.91
CPNE1-223ENST00000475146 PADI3Q9ULW8 664 aa26.96■■□□□ 1.91
CPNE1-223ENST00000475146 PCDHA12Q9UN75 941 aa26.96■■□□□ 1.91
CPNE1-223ENST00000475146 STBD1O95210 358 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 P4HBP07237 508 aaKnown RBP26.95■■□□□ 1.9
CPNE1-223ENST00000475146 TXKP42681 527 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 SPIRE1Q08AE8 756 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 TARBP2Q15633 366 aaKnown RBP26.95■■□□□ 1.9
CPNE1-223ENST00000475146 TMEM266Q2M3C6 531 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 NOSTRINQ8IVI9 506 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 TOP1MTQ969P6 601 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 OSMRQ99650 979 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 TTC12Q9H892 705 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-223ENST00000475146 CDHR5Q9HBB8 845 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 INSL6Q9Y581 213 aa26.95■■□□□ 1.9
CPNE1-223ENST00000475146 MYO9BQ13459 2157 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 NFX1Q12986 1120 aaKnown RBP26.94■■□□□ 1.9
CPNE1-223ENST00000475146 PLA2G4FQ68DD2 849 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 LINC01465Q8N7H1 131 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 ARNTL2Q8WYA1 636 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 YME1L1Q96TA2 773 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 LXNQ9BS40 222 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 FTHL17Q9BXU8 183 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 RGL1Q9NZL6 768 aa26.94■■□□□ 1.9
CPNE1-223ENST00000475146 LOXHD1Q8IVV2 1947 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms