RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GDPD5Q8WTR4 605 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 GJA10Q969M2 543 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 MBOAT7Q96N66 472 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 YME1L1Q96TA2 773 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 UNC45AQ9H3U1 944 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 DISC1Q9NRI5 854 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 DDX25Q9UHL0 483 aaKnown RBP11.49□□□□□ -0.57
SF3A3-204ENST00000462258 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 CEP131Q9UPN4 1083 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 INSL6Q9Y581 213 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 A0A0C4DFX4 3053 aa11.49□□□□□ -0.57
SF3A3-204ENST00000462258 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
SF3A3-204ENST00000462258 TTC3P53804 2025 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 SLC37A4O43826 429 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 JAK2O60674 1132 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 PSMD10O75832 226 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 UPP2O95045 317 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 FDPSP14324 419 aaKnown RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 KLRC1P26715 233 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 CD52P31358 61 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 KRT2P35908 639 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 PAK2Q13177 524 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 CCDC85BQ15834 202 aaPredicted RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 UGCGQ16739 394 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 PIK3AP1Q6ZUJ8 805 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 TRMT1LQ7Z2T5 733 aaKnown RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 NEK8Q86SG6 692 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 RDM1Q8NG50 284 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 ETNPPLQ8TBG4 499 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 TOP1MTQ969P6 601 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 TGS1Q96RS0 853 aaKnown RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 AGO3Q9H9G7 860 aaKnown RBP11.48□□□□□ -0.57
SF3A3-204ENST00000462258 BRMS1Q9HCU9 246 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 SQORQ9Y6N5 450 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 KDM3AQ9Y4C1 1321 aa11.48□□□□□ -0.57
SF3A3-204ENST00000462258 XIRP2A4UGR9 3374 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 ADGRA3Q8IWK6 1321 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 ZNF862O60290 1169 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 GCFC2P16383 781 aaKnown RBP11.47□□□□□ -0.57
SF3A3-204ENST00000462258 ERVK-21P61565 698 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 ST3GAL1Q11201 340 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 GRB10Q13322 594 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 NME8Q8N427 588 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 PPP1R16BQ96T49 567 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 FTHL17Q9BXU8 183 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 PRDM6Q9NQX0 595 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 THEGQ9P2T0 379 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 PADI3Q9ULW8 664 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
SF3A3-204ENST00000462258 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 DLL1O00548 723 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 CCNT1O60563 726 aaKnown RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 LPXNO60711 386 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 POU3F3P20264 500 aaPredicted RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 CLCN3P51790 818 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 FOSBP53539 338 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 NR5A1Q13285 461 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 EARS2Q5JPH6 523 aaKnown RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 KRT40Q6A162 431 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 PPP4R3AQ6IN85 833 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 B3GNT9Q6UX72 402 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 KIAA0319LQ8IZA0 1049 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 METTL13Q8N6R0 699 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 NAP1L4Q99733 375 aaKnown RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 RC3H2Q9HBD1 1191 aaKnown RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
SF3A3-204ENST00000462258 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
SF3A3-204ENST00000462258 FNDC1Q4ZHG4 1894 aaPredicted RBP11.45□□□□□ -0.58
SF3A3-204ENST00000462258 MAGEB2O15479 319 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 RPS6KA5O75582 802 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 MMP1P03956 469 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 VTNP04004 478 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 TRIM29Q14134 588 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 TMEM266Q2M3C6 531 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 CCDC83Q8IWF9 413 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 LRRC71Q8N4P6 559 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 BANK1Q8NDB2 785 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 TMEM40Q8WWA1 233 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 TNFRSF25Q93038 417 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 MAP7D2Q96T17 732 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 OSMRQ99650 979 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 COL25A1Q9BXS0 654 aaPredicted RBP11.45□□□□□ -0.58
SF3A3-204ENST00000462258 TSPYL2Q9H2G4 693 aaPredicted RBP11.45□□□□□ -0.58
SF3A3-204ENST00000462258 SUGCTQ9HAC7 445 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 NRBP2Q9NSY0 501 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 AKT3Q9Y243 479 aa11.45□□□□□ -0.58
SF3A3-204ENST00000462258 ENPP3O14638 875 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 TMOD1P28289 359 aa11.44□□□□□ -0.58
SF3A3-204ENST00000462258 CRYBB1P53674 252 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms