RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 BANK1Q8NDB2 785 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.34□□□□□ -0.59
RFX3-210ENST00000457373 TTC12Q9H892 705 aaPredicted RBP11.34□□□□□ -0.59
RFX3-210ENST00000457373 IL23AQ9NPF7 189 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 NRBP2Q9NSY0 501 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 TUBE1Q9UJT0 475 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 VAV3Q9UKW4 847 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 PCDHB6Q9Y5E3 794 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 EVPLQ92817 2033 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 TANC1Q9C0D5 1861 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
RFX3-210ENST00000457373 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 ZNF862O60290 1169 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 OATP04181 439 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 CTSHP09668 335 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 SELPP16109 830 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 PDCP20941 246 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 SYT1P21579 422 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 KLRC1P26715 233 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 TRAPPC10P48553 1259 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 TOB1P50616 345 aaPredicted RBP11.33□□□□□ -0.6
RFX3-210ENST00000457373 EPHA7Q15375 998 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 ZNF484Q5JVG2 852 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 MARCH8Q5T0T0 291 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 MTHFD1LQ6UB35 978 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 C16orf59Q7L2K0 433 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 FERMT3Q86UX7 667 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 DNAJB3Q8WWF6 145 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 DYDC2Q96IM9 177 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 MTMR9Q96QG7 549 aa11.33□□□□□ -0.6
RFX3-210ENST00000457373 FTOQ9C0B1 505 aaKnown RBP eCLIP11.33□□□□□ -0.6
RFX3-210ENST00000457373 COL1A2P08123 1366 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 FGBP02675 491 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 P4HBP07237 508 aaKnown RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 TECP42680 631 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 PSMC5P62195 406 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 PRKCEQ02156 737 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 RBL2Q08999 1139 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 RILPL1Q5EBL4 403 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 TMEM240Q5SV17 173 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 FAM167AQ96KS9 214 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
RFX3-210ENST00000457373 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 TNRC18O15417 2968 aaPredicted RBP11.32□□□□□ -0.6
RFX3-210ENST00000457373 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 MBLAC1A4D2B0 266 aaPredicted RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 TMEM150BA6NC51 233 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 POTEMA6NI47 508 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
RFX3-210ENST00000457373 RFC2P35250 354 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 QARSP47897 775 aaKnown RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 CYP4A11Q02928 519 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 MTERF2Q49AM1 385 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 XKR3Q5GH77 459 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 TAF2Q6P1X5 1199 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 PSRC1Q6PGN9 363 aaPredicted RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 RSPH3Q86UC2 560 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 TPH2Q8IWU9 490 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 EIF2AK1Q9BQI3 630 aaKnown RBP11.31□□□□□ -0.6
RFX3-210ENST00000457373 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 CEP131Q9UPN4 1083 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 PCDHA2Q9Y5H9 948 aa11.31□□□□□ -0.6
RFX3-210ENST00000457373 SMIM35A0A1B0GVV1 85 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 ZBBXA8MT70 800 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 STX6O43752 255 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 NBNO60934 754 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 SLITRK3O94933 977 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 STBD1O95210 358 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 TMEM62Q0P6H9 643 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 GPNMBQ14956 572 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 TMEM266Q2M3C6 531 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 BRAPQ7Z569 592 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 VWCEQ96DN2 955 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 LXNQ9BS40 222 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 WRAP73Q9P2S5 460 aaPredicted RBP11.3□□□□□ -0.6
RFX3-210ENST00000457373 CDY2AQ9Y6F7 541 aa11.3□□□□□ -0.6
RFX3-210ENST00000457373 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms