RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ATP2C1P98194 919 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-206ENST00000439717 MGAT3Q09327 533 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 RESTQ13127 1097 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 PDIA5Q14554 519 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 GPNMBQ14956 572 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 IER5Q5VY09 327 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 DTHD1Q6ZMT9 781 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 ANO5Q75V66 913 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 OTUD6AQ7L8S5 288 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
HSPG2-206ENST00000439717 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 EXOC8Q8IYI6 725 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 ZNF710Q8N1W2 664 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 ERMNQ8TAM6 284 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 RNPC3Q96LT9 517 aaKnown RBP13.24□□□□□ -0.29
HSPG2-206ENST00000439717 POLR3CQ9BUI4 534 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-206ENST00000439717 FTOQ9C0B1 505 aaKnown RBP eCLIP13.24□□□□□ -0.296e-9■□□□□ 9.2
HSPG2-206ENST00000439717 FAM49AQ9H0Q0 323 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-206ENST00000439717 TUFT1Q9NNX1 390 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 M0QZ92 97 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 NBNO60934 754 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 BAIAP3O94812 1187 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CHRNA1P02708 482 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CTSHP09668 335 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 XRCC6P12956 609 aaKnown RBP eCLIP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 MRPS6P82932 125 aaKnown RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CYP4A11Q02928 519 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CTTNQ14247 550 aaKnown RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 BECN1Q14457 450 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 MBTPS1Q14703 1052 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CNKSR3Q6P9H4 555 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 TPH2Q8IWU9 490 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 KIAA0319LQ8IZA0 1049 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 IGSF22Q8N9C0 903 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 ZBTB10Q96DT7 871 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 CEP89Q96ST8 783 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 JPH2Q9BR39 696 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-206ENST00000439717 SQORQ9Y6N5 450 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
HSPG2-206ENST00000439717 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
HSPG2-206ENST00000439717 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 EFCAB14O75071 495 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 MUTP22033 750 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 RPA1P27694 616 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 MTERF2Q49AM1 385 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 HAUS3Q68CZ6 603 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 EFCAB12Q6NXP0 572 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-206ENST00000439717 OTOP2Q7RTS6 562 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 LINC01465Q8N7H1 131 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 USP38Q8NB14 1042 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 CYP26B1Q9NR63 512 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 ANKEF1Q9NU02 776 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 LRWD1Q9UFC0 647 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 TRPV2Q9Y5S1 764 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 CDY2AQ9Y6F7 541 aa13.22□□□□□ -0.29
HSPG2-206ENST00000439717 IGKV6-21A0A0C4DH24 114 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 ABHD14A-ACY1A0A1B0GW23 586 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 MAFO75444 373 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-206ENST00000439717 SPATA31C1P0DKV0 1188 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 RFC5P40937 340 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 DNM2P50570 870 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 PLEKHG4Q58EX7 1191 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 PLA2G4FQ68DD2 849 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 SEPT8Q92599 483 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 APBB2Q92870 758 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 CELF4Q9BZC1 486 aaKnown RBP13.21□□□□□ -0.29
HSPG2-206ENST00000439717 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
HSPG2-206ENST00000439717 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 GAS2O43903 313 aaKnown RBP13.2□□□□□ -0.3
HSPG2-206ENST00000439717 MED24O75448 989 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 CLCN3P51790 818 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 NPEPPSP55786 919 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 SMAD3P84022 425 aaKnown RBP13.2□□□□□ -0.3
HSPG2-206ENST00000439717 TMEM62Q0P6H9 643 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 IKBKEQ14164 716 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
HSPG2-206ENST00000439717 IL17AQ16552 155 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 XKR9Q5GH70 373 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 FBXO47Q5MNV8 452 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 PHOSPHO2Q8TCD6 241 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 SLC7A3Q8WY07 619 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 AK8Q96MA6 479 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
HSPG2-206ENST00000439717 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
HSPG2-206ENST00000439717 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms