RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 MRPL11Q9Y3B7 192 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-208ENST00000436638 KIF3AQ9Y496 699 aa7.04□□□□□ -1.28
ECHDC1-208ENST00000436638 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-208ENST00000436638 NID2Q14112 1375 aa7.04□□□□□ -1.28
ECHDC1-208ENST00000436638 ADGRA2Q96PE1 1338 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 hCG_1642624A0A1W2PR95 340 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PTPDC1A2A3K4 754 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 hCG_1984214I3L0E3 225 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 K7ELQ4 463 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ATP2A1O14983 1001 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 FOXN1O15353 648 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CYTH3O43739 400 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CNMDO75829 334 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 LARGE1O95461 756 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 FCER1AP12319 257 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SCG2P13521 617 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 EPB42P16452 691 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PSMC4P43686 418 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 GYS2P54840 703 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 TRIM29Q14134 588 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 KCTD2Q14681 263 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SF3A1Q15459 793 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 C16orf46Q6P387 395 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 HEATR3Q7Z4Q2 680 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PLEKHH3Q7Z736 793 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 MCF2L2Q86YR7 1114 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ANKRD35Q8N283 1001 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ZNF713Q8N859 430 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CCDC148Q8NFR7 591 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ATL2Q8NHH9 583 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CD99L2Q8TCZ2 262 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CCDC12Q8WUD4 166 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ZNF296Q8WUU4 475 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 CUL5Q93034 780 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PHKBQ93100 1093 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SNX21Q969T3 373 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 MTMR8Q96EF0 704 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 TMX3Q96JJ7 454 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PNMA5Q96PV4 448 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 MMP19Q99542 508 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SENP7Q9BQF6 1050 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 R3HDMLQ9H3Y0 253 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 IGFLR1Q9H665 355 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ACAD9Q9H845 621 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 EFCC1Q9HA90 598 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SLC5A4Q9NY91 659 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ORC3Q9UBD5 711 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 FBXO9Q9UK97 447 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 ZNF214Q9UL59 606 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 SMC3Q9UQE7 1217 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
ECHDC1-208ENST00000436638 STRNO43815 780 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 PEX10O60683 326 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 SIN3BO75182 1162 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 HSPA8P11142 646 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 ALAS2P22557 587 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 BDNFP23560 247 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 ARSDP51689 593 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 LBX1P52954 281 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 NAPAP54920 295 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 PRMT2P55345 433 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 NLRP5P59047 1200 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 SNRPNP63162 240 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 TBC1D8BQ0IIM8 1120 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 KCNMA1Q12791 1236 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 PFKFB3Q16875 520 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 NSMFQ6X4W1 530 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 RNF207Q6ZRF8 634 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 GPR142Q7Z601 462 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 DPP9Q86TI2 863 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 SAMD3Q8N6K7 520 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 SOCS4Q8WXH5 440 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 COL26A1Q96A83 441 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 MPHOSPH6Q99547 160 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 ALG1Q9BT22 464 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 GLT8D2Q9H1C3 349 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 PORCNQ9H237 461 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 TRIM17Q9Y577 477 aa7.02□□□□□ -1.29
ECHDC1-208ENST00000436638 PFASO15067 1338 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 ZNF536O15090 1300 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 STK36Q9NRP7 1315 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 hCG_2014768A0A024R1R8 64 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 ELOA3CA0A087WX78 387 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 SLC15A5A6NIM6 579 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 ELOA3DA6NLF2 546 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 B4DLN1 442 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 GCOM1H8Y6P7 765 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 CFBP00751 764 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 POLR2MP0CAP2 368 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 FAM200BP0CF97 657 aa7.01□□□□□ -1.29
ECHDC1-208ENST00000436638 CALML3P27482 149 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms