RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GINS2Q9Y248 185 aa19.84■□□□□ 0.77
NUP50-208ENST00000430547 EPOPA6NHQ4 379 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 GCFC2P16383 781 aaKnown RBP19.83■□□□□ 0.77
NUP50-208ENST00000430547 KRT2P35908 639 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 PRKCEQ02156 737 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 TRIM29Q14134 588 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 PIK3AP1Q6ZUJ8 805 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 METTL13Q8N6R0 699 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 RDM1Q8NG50 284 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 GJA10Q969M2 543 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 NAP1L4Q99733 375 aaKnown RBP19.83■□□□□ 0.77
NUP50-208ENST00000430547 FTHL17Q9BXU8 183 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 NRBP2Q9NSY0 501 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 GJB4Q9NTQ9 266 aa19.83■□□□□ 0.77
NUP50-208ENST00000430547 PRRC2BQ5JSZ5 2229 aaKnown RBP19.83■□□□□ 0.76
NUP50-208ENST00000430547 KDM3AQ9Y4C1 1321 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 TTC3P53804 2025 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 ZBTB42B2RXF5 422 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 MARCH6O60337 910 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 CCNT1O60563 726 aaKnown RBP19.82■□□□□ 0.76
NUP50-208ENST00000430547 PSMD10O75832 226 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 C22orf31O95567 290 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 OATP04181 439 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 ERVK-21P61565 698 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 SPRED2Q7Z698 418 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 NSUN7Q8NE18 718 aaKnown RBP19.82■□□□□ 0.76
NUP50-208ENST00000430547 MBOAT7Q96N66 472 aa19.82■□□□□ 0.76
NUP50-208ENST00000430547 AGO3Q9H9G7 860 aaKnown RBP19.82■□□□□ 0.76
NUP50-208ENST00000430547 COL4A6Q14031 1691 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 MAGEB2O15479 319 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 TMOD1P28289 359 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 GRB10Q13322 594 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 SKIV2LQ15477 1246 aaKnown RBP19.81■□□□□ 0.76
NUP50-208ENST00000430547 ODR4Q5SWX8 454 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 KIAA0319LQ8IZA0 1049 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 ETNPPLQ8TBG4 499 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 OXER1Q8TDS5 423 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 GDPD5Q8WTR4 605 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 MAP7D2Q96T17 732 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 THEGQ9P2T0 379 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 PADI3Q9ULW8 664 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
NUP50-208ENST00000430547 ENPP3O14638 875 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 SLC37A4O43826 429 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 FDPSP14324 419 aaKnown RBP19.8■□□□□ 0.76
NUP50-208ENST00000430547 POU3F3P20264 500 aaPredicted RBP19.8■□□□□ 0.76
NUP50-208ENST00000430547 FOSBP53539 338 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 NFX1Q12986 1120 aaKnown RBP19.8■□□□□ 0.76
NUP50-208ENST00000430547 UGCGQ16739 394 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 PPP4R3AQ6IN85 833 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 FBXO22Q8NEZ5 403 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 SP7Q8TDD2 431 aaPredicted RBP19.8■□□□□ 0.76
NUP50-208ENST00000430547 SAMD11Q96NU1 681 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 PPP1R16BQ96T49 567 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 SEPT9Q9UHD8 586 aaPredicted RBP19.8■□□□□ 0.76
NUP50-208ENST00000430547 LIMCH1Q9UPQ0 1083 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 AKT3Q9Y243 479 aa19.8■□□□□ 0.76
NUP50-208ENST00000430547 ZNF862O60290 1169 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 JAK2O60674 1132 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 RPS6KA5O75582 802 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 TBC1D8BQ0IIM8 1120 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 C8orf34Q49A92 452 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 FAM20AQ96MK3 541 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 C17orf80Q9BSJ5 609 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 PRDM6Q9NQX0 595 aa19.79■□□□□ 0.76
NUP50-208ENST00000430547 VTNP04004 478 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 CLCN3P51790 818 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 NR5A1Q13285 461 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 KIZQ2M2Z5 673 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 TMEM266Q2M3C6 531 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 EFCAB12Q6NXP0 572 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 FIBCD1Q8N539 461 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 SUGCTQ9HAC7 445 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 LMCD1Q9NZU5 365 aa19.78■□□□□ 0.76
NUP50-208ENST00000430547 ADGRA3Q8IWK6 1321 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 TBX3O15119 743 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 GPR182O15218 404 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 BAG4O95429 457 aaKnown RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 MMP1P03956 469 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 STAG3L1P0CL83 205 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 CRYBB1P53674 252 aaPredicted RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 XKR3Q5GH77 459 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 KRT40Q6A162 431 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 FAM43BQ6ZT52 329 aaPredicted RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 CCDC83Q8IWF9 413 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 LRRC71Q8N4P6 559 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 ATXN2LQ8WWM7 1075 aaKnown RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 SYMPKQ92797 1274 aaKnown RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 SCLT1Q96NL6 688 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 OSMRQ99650 979 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 KCNMB3Q9NPA1 279 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 LRFN2Q9ULH4 789 aa19.77■□□□□ 0.76
NUP50-208ENST00000430547 NOC2LQ9Y3T9 749 aaKnown RBP19.77■□□□□ 0.76
NUP50-208ENST00000430547 REV3LO60673 3130 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 DENND3A2RUS2 1198 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 LPXNO60711 386 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 DKC1O60832 514 aaKnown RBP eCLIP19.76■□□□□ 0.75
NUP50-208ENST00000430547 IBSPP21815 317 aaPredicted RBP19.76■□□□□ 0.75
NUP50-208ENST00000430547 PPP2R5CQ13362 524 aa19.76■□□□□ 0.75
NUP50-208ENST00000430547 SAFBQ15424 915 aaKnown RBP eCLIP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms