RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 TSPAN6O43657 245 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 LSP1P33241 339 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 RAB27AP51159 221 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 KLF1Q13351 362 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 TUSC3Q13454 348 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 PIN1Q13526 163 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 ABCB5Q2M3G0 1257 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 ESRP1Q6NXG1 681 aaKnown RBP8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 GGT6Q6P531 493 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 ZBTB46Q86UZ6 589 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 TOMM22Q9NS69 142 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 PCDHB4Q9Y5E5 795 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 NHSL1Q5SYE7 1610 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 FAM135AQ9P2D6 1515 aa8.38□□□□□ -1.07
HMGB1P32-201ENST00000425971 FGD6Q6ZV73 1430 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 TCRBV5S2A0A599 114 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 FAM90A27PA6NNH2 459 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 FZD9O00144 591 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 LTFP02788 710 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 C4BPAP04003 597 aaKnown RBP8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 RAC2P15153 192 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 PTPN1P18031 435 aaKnown RBP8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 SDHAP31040 664 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 ARL4AP40617 200 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 IARSP41252 1262 aaKnown RBP8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 RBM6P78332 1123 aaKnown RBP8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 LRRC32Q14392 662 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 PPP2R5AQ15172 486 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 EP400NLQ6ZTU2 488 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 RASSF3Q86WH2 238 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 MYLIPQ8WY64 445 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 HOOK2Q96ED9 719 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 AP5M1Q9H0R1 490 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 MS4A5Q9H3V2 200 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 PALD1Q9ULE6 856 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 SIT1Q9Y3P8 196 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 ATP7AQ04656 1500 aa8.37□□□□□ -1.07
HMGB1P32-201ENST00000425971 E2F8A0AVK6 867 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 BUB1BO60566 1050 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 WNT11O96014 354 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 CYBBP04839 570 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 CYP17A1P05093 508 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 PTX3P26022 381 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 FNTBP49356 437 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 GALK1P51570 392 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 LRRC41Q15345 812 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 RBM12BQ8IXT5 1001 aaKnown RBP8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 CAMKK2Q96RR4 588 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 RTFDC1Q9BY42 306 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 ZDHHC5Q9C0B5 715 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 CDH19Q9H159 772 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 C14orf119Q9NWQ9 140 aa8.36□□□□□ -1.07
HMGB1P32-201ENST00000425971 SAMD9LQ8IVG5 1584 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 CDC42BPBQ9Y5S2 1711 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 EPHA7Q15375 998 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 CATSPEREQ5SY80 951 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 BTBD8Q5XKL5 378 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 PAQR3Q6TCH7 311 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 TRIM48Q8IWZ4 208 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 TP53INP2Q8IXH6 220 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 ZZZ3Q8IYH5 903 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 PEX11GQ96HA9 241 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 FUBP3Q96I24 572 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 SLC13A1Q9BZW2 595 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 TOPORSQ9NS56 1045 aaPredicted RBP8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 NUDT5Q9UKK9 219 aa8.35□□□□□ -1.07
HMGB1P32-201ENST00000425971 WASHC2AQ641Q2 1341 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 NLRP1Q9C000 1473 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 RASSF10A6NK89 507 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 ABLIM3O94929 683 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 MT-CO1P00395 513 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 CD40P25942 277 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 KRT85P78386 507 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 Q8N3U1 123 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 C1orf162Q8NEQ5 155 aaPredicted RBP8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 FLAD1Q8NFF5 587 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 RNF32Q9H0A6 362 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 RC3H2Q9HBD1 1191 aaKnown RBP8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 AASDHPPTQ9NRN7 309 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 RIC8BQ9NVN3 520 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 ZIM2Q9NZV7 527 aa8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 YBX2Q9Y2T7 364 aaKnown RBP8.34□□□□□ -1.07
HMGB1P32-201ENST00000425971 PZPP20742 1482 aa8.33□□□□□ -1.08
HMGB1P32-201ENST00000425971 ZC3H12DA2A288 527 aaKnown RBP8.33□□□□□ -1.08
HMGB1P32-201ENST00000425971 ACOT7O00154 380 aa8.33□□□□□ -1.08
HMGB1P32-201ENST00000425971 MYBL2P10244 700 aa8.33□□□□□ -1.08
HMGB1P32-201ENST00000425971 NWD1Q149M9 1564 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms