RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GPS2Q13227 327 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 PAPD7Q5XG87 772 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 CTAGE6Q86UF2 777 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 DNAAF5Q86Y56 855 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 CTAGE4Q8IX94 777 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 FAM133AQ8N9E0 248 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 ARMCX3Q9UH62 379 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 GJA3Q9Y6H8 435 aa16.68■□□□□ 0.26
SCAMP4-202ENST00000409472 PDXKO00764 312 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 TRAF1Q13077 416 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 MAEAQ7L5Y9 396 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 SUGCTQ9HAC7 445 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 TYW1Q9NV66 732 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 PCDHB13Q9Y5F0 798 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 FLOT1O75955 427 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 EIF2AK2P19525 551 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 EPS15P42566 896 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 VSNL1P62760 191 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 DAW1Q8N136 415 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 PRPF38AQ8NAV1 312 aaKnown RBP16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 PSMB7Q99436 277 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 TEKT3Q9BXF9 490 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 BCS1LQ9Y276 419 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
SCAMP4-202ENST00000409472 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 NCK2O43639 380 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 TGFB2P61812 414 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SETQ01105 290 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SFMBT2Q5VUG0 894 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 TCERG1LQ5VWI1 586 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 GJB7Q6PEY0 223 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 TRMT1LQ7Z2T5 733 aaKnown RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 GOLGA6L1Q8N7Z2 621 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SLC35C1Q96A29 364 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 KIAA1683Q9H0B3 1180 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SLC38A10Q9HBR0 1119 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SMARCAL1Q9NZC9 954 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 BUB1O43683 1085 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 MAGEA1P43355 309 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 MAPK7Q13164 816 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 PLS1Q14651 629 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 ZKSCAN4Q969J2 545 aaPredicted RBP16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 TAAR1Q96RJ0 339 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 PACSIN1Q9BY11 444 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 EHD2Q9NZN4 543 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 FAM184BQ9ULE4 1060 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
SCAMP4-202ENST00000409472 DOCK1Q14185 1865 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 CALUO43852 315 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 XRCC5P13010 732 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 EPHA7Q15375 998 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 ICE2Q659A1 982 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 FRMD5Q7Z6J6 570 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 EHBP1Q8NDI1 1231 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 COG1Q8WTW3 980 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 RPAP3Q9H6T3 665 aaPredicted RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 EHMT1Q9H9B1 1298 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 RIPK3Q9Y572 518 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 ZNF541Q9H0D2 1346 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 A0A087X0T9 212 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 TISP43B9A030 160 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 FAM228BP0C875 321 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 PON1P27169 355 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 RPS6P62753 249 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 UGCGQ16739 394 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 TKFCQ3LXA3 575 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 RBM46Q8TBY0 533 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 FUT8Q9BYC5 575 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 EDEM3Q9BZQ6 932 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 SIX2Q9NPC8 291 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
SCAMP4-202ENST00000409472 SSU72P8A0A1W2PR75 194 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 HIP1RO75146 1068 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 CXCR5P32302 372 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 ZNF131P52739 623 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 LONRF2Q1L5Z9 754 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 NFRKBQ6P4R8 1299 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 ATG4CQ96DT6 458 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 BORCS6Q96GS4 357 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 MYCBPQ99417 103 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 RLFQ13129 1914 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 SERPING1P05155 500 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 UCHL3P15374 230 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 GAP43P17677 238 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 TNIP1Q15025 636 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 ODR4Q5SWX8 454 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 MIER3Q7Z3K6 550 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 216.6 ms