RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TMOD1P28289 359 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 CD52P31358 61 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 INF2Q27J81 1249 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 LETM2Q2VYF4 491 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 FAM43BQ6ZT52 329 aaPredicted RBP15.51■□□□□ 0.07
CXCL12-205ENST00000395794 MIER3Q7Z3K6 550 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 FBXO22Q8NEZ5 403 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 NAP1L4Q99733 375 aaKnown RBP15.51■□□□□ 0.07
CXCL12-205ENST00000395794 A0A0C4DFX4 3053 aa15.51■□□□□ 0.07
CXCL12-205ENST00000395794 IGSF9BQ9UPX0 1349 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 KDM3AQ9Y4C1 1321 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 KAT6AQ92794 2004 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 ATXN8OSP0DMR3 200 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 ATP4AP20648 1035 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 MRPS5P82675 430 aaKnown RBP15.5■□□□□ 0.07
CXCL12-205ENST00000395794 TRIM29Q14134 588 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 AAK1Q2M2I8 961 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 TJAP1Q5JTD0 557 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 NEK8Q86SG6 692 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 KIAA0319LQ8IZA0 1049 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 FIBCD1Q8N539 461 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 NECAB1Q8N987 351 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 GDPD5Q8WTR4 605 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 GTF3C6Q969F1 213 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 COL25A1Q9BXS0 654 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-205ENST00000395794 UNC45AQ9H3U1 944 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 AGO3Q9H9G7 860 aaKnown RBP15.5■□□□□ 0.07
CXCL12-205ENST00000395794 SUGCTQ9HAC7 445 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 PRDM6Q9NQX0 595 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 LMCD1Q9NZU5 365 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 PADI3Q9ULW8 664 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 EYSQ5T1H1 3165 aa15.5■□□□□ 0.07
CXCL12-205ENST00000395794 UNC80Q8N2C7 3258 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 ZBTB42B2RXF5 422 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 EDIL3O43854 480 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 RPS6KA5O75582 802 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 C22orf31O95567 290 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 OATP04181 439 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 GCFC2P16383 781 aaKnown RBP15.49■□□□□ 0.07
CXCL12-205ENST00000395794 NFX1Q12986 1120 aaKnown RBP15.49■□□□□ 0.07
CXCL12-205ENST00000395794 NPY5RQ15761 445 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 ME3Q16798 604 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 PTPROQ16827 1216 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 SPRED2Q7Z698 418 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 ZNF710Q8N1W2 664 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 MAP7D2Q96T17 732 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 C17orf80Q9BSJ5 609 aa15.49■□□□□ 0.07
CXCL12-205ENST00000395794 RBAK-RBAKDNI3L0D1 243 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 GPR182O15218 404 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 CCNT1O60563 726 aaKnown RBP15.48■□□□□ 0.07
CXCL12-205ENST00000395794 PSMD10O75832 226 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 CTDNEP1O95476 244 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 STAG3L1P0CL83 205 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 KRT2P35908 639 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 CRYBB1P53674 252 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-205ENST00000395794 PRKCEQ02156 737 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 EPC2Q52LR7 807 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 PIK3AP1Q6ZUJ8 805 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 GJA10Q969M2 543 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 FAM20AQ96MK3 541 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 MBOAT7Q96N66 472 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 ASB2Q96Q27 587 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 CHD7Q9P2D1 2997 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 LRFN2Q9ULH4 789 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 AKT3Q9Y243 479 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 RWDD3Q9Y3V2 267 aa15.48■□□□□ 0.07
CXCL12-205ENST00000395794 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 LPXNO60711 386 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 SEC24BO95487 1268 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 TBC1D8BQ0IIM8 1120 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 BTG3Q14201 252 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-205ENST00000395794 KIZQ2M2Z5 673 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 TMEM266Q2M3C6 531 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 KRT40Q6A162 431 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 PPP4R3AQ6IN85 833 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 EFCAB12Q6NXP0 572 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 NPAS4Q8IUM7 802 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 ETNPPLQ8TBG4 499 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 GJB4Q9NTQ9 266 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 SEPT9Q9UHD8 586 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-205ENST00000395794 COG5Q9UP83 839 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
CXCL12-205ENST00000395794 ADGRA3Q8IWK6 1321 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 ZNF862O60290 1169 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 DKC1O60832 514 aaKnown RBP eCLIP15.46■□□□□ 0.07
CXCL12-205ENST00000395794 DTNBO60941 627 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 BAG4O95429 457 aaKnown RBP15.46■□□□□ 0.07
CXCL12-205ENST00000395794 VTNP04004 478 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 DNM2P50570 870 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 GPM6BQ13491 265 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 XKR3Q5GH77 459 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 OXER1Q8TDS5 423 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 SCLT1Q96NL6 688 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 PPP1R16BQ96T49 567 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 OSMRQ99650 979 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 NOC2LQ9Y3T9 749 aaKnown RBP15.46■□□□□ 0.07
CXCL12-205ENST00000395794 PTPRSQ13332 1948 aa15.46■□□□□ 0.07
CXCL12-205ENST00000395794 MICAL3Q7RTP6 2002 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms