RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 BAG2O95816 211 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GYS2P54840 703 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 RWDD2BP57060 319 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 MECOMQ03112 1051 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 RINT1Q6NUQ1 792 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 OSBPL9Q96SU4 736 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 AS3MTQ9HBK9 375 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 SPATS2LQ9NUQ6 558 aaKnown RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 LIMA1Q9UHB6 759 aaKnown RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 CAPN11Q9UMQ6 739 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 NEDD4P46934 1319 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 CYP2D7A0A087X1C5 515 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GOLGA8QA0A0J9YX86 632 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GOLGA8OA6NCC3 632 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GOLGA8NF8WBI6 632 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 CLIC2O15247 247 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 PALMO75781 387 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GARSP41250 739 aaKnown RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 YWHAGP61981 247 aaKnown RBP eCLIP9.05□□□□□ -0.96
VPS36-201ENST00000378060 ATP2C1P98194 919 aaPredicted RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 AP3B2Q13367 1082 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 ZKSCAN8Q15776 578 aaPredicted RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 ENAHQ8N8S7 591 aaPredicted RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 CEP120Q8N960 986 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 NSMCE1Q8WV22 266 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 WDR24Q96S15 920 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 JPH2Q9BR39 696 aaPredicted RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 NRBP2Q9NSY0 501 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 LRRN2O75325 713 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 FGGP02679 453 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 CSF1RP07333 972 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 SKIP12755 728 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 RBBP5Q15291 538 aaKnown RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 AP1ARQ63HQ0 302 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 CYP4F22Q6NT55 531 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 CAPN12Q6ZSI9 719 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 RPAINQ86UA6 219 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 METTL16Q86W50 562 aaKnown RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 SCYL3Q8IZE3 742 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 GPR101Q96P66 508 aaPredicted RBP9.05□□□□□ -0.96
VPS36-201ENST00000378060 CD2APQ9Y5K6 639 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 ITIH6Q6UXX5 1313 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 NRXN2Q9P2S2 1712 aa9.05□□□□□ -0.96
VPS36-201ENST00000378060 IPO5O00410 1097 aaKnown RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 BMP3P12645 472 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 CYP2C19P33261 490 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 PIK3CAP42336 1068 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 KAZNQ674X7 775 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 STOX1Q6ZVD7 989 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 TRIM50Q86XT4 487 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 KIAA0825Q8IV33 1275 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 UBE2TQ9NPD8 197 aaPredicted RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 GMNCA6NCL1 334 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 LRRC53A6NM62 1247 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 H7C0C1 242 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 OPHN1O60890 802 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 SRGAP2O75044 1071 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 ATP5HO75947 161 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 POLD1P28340 1107 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 MSH2P43246 934 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 ATP5OP48047 213 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 CDK8P49336 464 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 SCNN1DP51172 638 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 NR1H3Q13133 447 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 FAM83BQ5T0W9 1011 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 SCYL2Q6P3W7 929 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 RASGRP2Q7LDG7 609 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 CSRNP1Q96S65 589 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 AP1M1Q9BXS5 423 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 CCPG1Q9ULG6 757 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 PCDHB4Q9Y5E5 795 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 IVNS1ABPQ9Y6Y0 642 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 TRIM49BA6NDI0 452 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 SGK1O00141 431 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 CLGNO14967 610 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 MAPK13O15264 365 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 PPIP5K2O43314 1243 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 RPSAP08865 295 aaKnown RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 PRR29P0C7W0 189 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 POLGP54098 1239 aaPredicted RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 YARSP54577 528 aaKnown RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 CAV1Q03135 178 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 DBN1Q16643 649 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 BSPRYQ5W0U4 402 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 ELOA2Q8IYF1 753 aaPredicted RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 BANK1Q8NDB2 785 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 OXER1Q8TDS5 423 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 ADPGKQ9BRR6 497 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 SLITRK6Q9H5Y7 841 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 NOP53Q9NZM5 478 aaKnown RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 FBXO2Q9UK22 296 aaPredicted RBP9.04□□□□□ -0.96
VPS36-201ENST00000378060 EXOC1LA0A1B0GW35 172 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 LRRIQ4A6NIV6 560 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 MT-ND3P03897 115 aa9.04□□□□□ -0.96
VPS36-201ENST00000378060 PTGER2P43116 358 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms