RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PRKCEQ02156 737 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 TMEM62Q0P6H9 643 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 MYOCDQ8IZQ8 938 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 USP38Q8NB14 1042 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 RAD9AQ99638 391 aa31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 CELF4Q9BZC1 486 aaKnown RBP31.11■■■□□ 2.57
ATPAF1-201ENST00000329231 MAGEB2O15479 319 aa31.1■■■□□ 2.57
ATPAF1-201ENST00000329231 UGCGQ16739 394 aa31.1■■■□□ 2.57
ATPAF1-201ENST00000329231 KIAA0319LQ8IZA0 1049 aa31.1■■■□□ 2.57
ATPAF1-201ENST00000329231 C8orf76Q96K31 380 aa31.1■■■□□ 2.57
ATPAF1-201ENST00000329231 KDM3AQ9Y4C1 1321 aa31.09■■■□□ 2.57
ATPAF1-201ENST00000329231 PPP2R5CQ13362 524 aa31.09■■■□□ 2.57
ATPAF1-201ENST00000329231 FAM184AQ8NB25 1140 aa31.09■■■□□ 2.57
ATPAF1-201ENST00000329231 MAFAQ8NHW3 353 aaPredicted RBP31.09■■■□□ 2.57
ATPAF1-201ENST00000329231 BAG4O95429 457 aaKnown RBP31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 TAP1Q03518 808 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 FAM117BQ6P1L5 589 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 POTEDQ86YR6 584 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 SLFN12Q8IYM2 578 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 METTL13Q8N6R0 699 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 HAS1Q92839 578 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 VAV3Q9UKW4 847 aa31.08■■■□□ 2.57
ATPAF1-201ENST00000329231 MICAL3Q7RTP6 2002 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 PTPRSQ13332 1948 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 GUCY1B3Q02153 619 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 INSL6Q9Y581 213 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 COL6A3P12111 3177 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 CDH23Q9H251 3354 aa31.07■■■□□ 2.56
ATPAF1-201ENST00000329231 XKR3Q5GH77 459 aa31.06■■■□□ 2.56
ATPAF1-201ENST00000329231 TOP1MTQ969P6 601 aa31.06■■■□□ 2.56
ATPAF1-201ENST00000329231 TBC1D32Q96NH3 1257 aa31.06■■■□□ 2.56
ATPAF1-201ENST00000329231 AGO3Q9H9G7 860 aaKnown RBP31.06■■■□□ 2.56
ATPAF1-201ENST00000329231 LCHNA4D1U4 455 aa31.05■■■□□ 2.56
ATPAF1-201ENST00000329231 TMOD1P28289 359 aa31.05■■■□□ 2.56
ATPAF1-201ENST00000329231 CD52P31358 61 aa31.05■■■□□ 2.56
ATPAF1-201ENST00000329231 PSMC5P62195 406 aa31.05■■■□□ 2.56
ATPAF1-201ENST00000329231 GINS2Q9Y248 185 aa31.05■■■□□ 2.56
ATPAF1-201ENST00000329231 SIP14410 1827 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 EML1O00423 815 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 ARHGEF15O94989 841 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 PAK2Q13177 524 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 EFCAB12Q6NXP0 572 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 BANK1Q8NDB2 785 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 FBXO18Q8NFZ0 1043 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 MAP7D2Q96T17 732 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 FTHL17Q9BXU8 183 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 NIFKQ9BYG3 293 aaKnown RBP31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 BACH2Q9BYV9 841 aa31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 SEPT9Q9UHD8 586 aaPredicted RBP31.04■■■□□ 2.56
ATPAF1-201ENST00000329231 MYO9BQ13459 2157 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 WDR81Q562E7 1941 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 DKC1O60832 514 aaKnown RBP eCLIP31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 UPP2O95045 317 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 HTRA4P83105 476 aaPredicted RBP31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 TBC1D8BQ0IIM8 1120 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 SLC17A8Q8NDX2 589 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 FOXP1Q9H334 677 aaPredicted RBP31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 CERS4Q9HA82 394 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 PADI3Q9ULW8 664 aa31.03■■■□□ 2.56
ATPAF1-201ENST00000329231 ENPP3O14638 875 aa31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 QARSP47897 775 aaKnown RBP31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 CLCN3P51790 818 aa31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 TARBP2Q15633 366 aaKnown RBP31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 CALCRLQ16602 461 aa31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 FAM43BQ6ZT52 329 aaPredicted RBP31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 ZNF710Q8N1W2 664 aa31.02■■■□□ 2.56
ATPAF1-201ENST00000329231 CHD9Q3L8U1 2897 aa31.01■■■□□ 2.56
ATPAF1-201ENST00000329231 DDX11L8A8MPP1 907 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 NEMFO60524 1076 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 STBD1O95210 358 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 VTNP04004 478 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 P4HBP07237 508 aaKnown RBP31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 IGFBP4P22692 258 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 MCM2P49736 904 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 CRYBB1P53674 252 aaPredicted RBP31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 ADGRE1Q14246 886 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 EPHA7Q15375 998 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 ODR4Q5SWX8 454 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 LINC01465Q8N7H1 131 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 ARNTL2Q8WYA1 636 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 YME1L1Q96TA2 773 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 AKT3Q9Y243 479 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 KIF3AQ9Y496 699 aa31.01■■■□□ 2.55
ATPAF1-201ENST00000329231 GNL2Q13823 731 aaKnown RBP31■■■□□ 2.55
ATPAF1-201ENST00000329231 KIZQ2M2Z5 673 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 MTERF2Q49AM1 385 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 NCAPH2Q6IBW4 605 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 LRRC71Q8N4P6 559 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 SUGCTQ9HAC7 445 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 CDHR5Q9HBB8 845 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 PCDHA12Q9UN75 941 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 EVPLQ92817 2033 aa31■■■□□ 2.55
ATPAF1-201ENST00000329231 LINC01553A4QN01 128 aa30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 RPS6KA5O75582 802 aa30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 SPIRE1Q08AE8 756 aa30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 TMX3Q96JJ7 454 aa30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 TGS1Q96RS0 853 aaKnown RBP30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 PPP1R16BQ96T49 567 aa30.99■■■□□ 2.55
ATPAF1-201ENST00000329231 WNT7AO00755 349 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms