RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	RPS8A	P0CX39	200 aa	Known RBP	3.21	□□□□□ -1.9
snR11	snR11	RPS8B	P0CX40	200 aa	Known RBP	3.21	□□□□□ -1.9
snR11	snR11	YSC83	P32792	385 aa		3.21	□□□□□ -1.9
snR11	snR11	GDT1	P38301	280 aa	Predicted RBP	3.21	□□□□□ -1.9
snR11	snR11	YHR131C	P38835	850 aa		3.21	□□□□□ -1.9
snR11	snR11	PAN6	P40459	309 aa		3.21	□□□□□ -1.9
snR11	snR11	HMS2	P47175	358 aa		3.21	□□□□□ -1.9
snR11	snR11	PIB2	P53191	635 aa		3.21	□□□□□ -1.9
snR11	snR11	YMR111C	Q04461	462 aa	Predicted RBP	3.21	□□□□□ -1.9
snR11	snR11	RNH1	Q04740	348 aa		3.21	□□□□□ -1.9
snR11	snR11	PAL1	Q05518	499 aa	Known RBP	3.21	□□□□□ -1.9
snR11	snR11	HRI1	Q05905	244 aa	Known RBP	3.21	□□□□□ -1.9
snR11	snR11	IPK1	Q06667	281 aa		3.21	□□□□□ -1.9
snR11	snR11	SKI7	Q08491	747 aa	Predicted RBP	3.21	□□□□□ -1.9
snR11	snR11	SNX3	Q08826	162 aa	Known RBP	3.21	□□□□□ -1.9
snR11	snR11	MED2	Q12124	431 aa		3.21	□□□□□ -1.9
snR11	snR11	NBL1	Q3E7Y6	73 aa		3.21	□□□□□ -1.9
snR11	snR11	NFT1	P0CE68	1218 aa		3.2	□□□□□ -1.9
snR11	snR11	SLY1	P22213	666 aa		3.2	□□□□□ -1.9
snR11	snR11	DAL2	P25335	343 aa		3.2	□□□□□ -1.9
snR11	snR11	RPT5	P33297	434 aa	Known RBP	3.2	□□□□□ -1.9
snR11	snR11	RRN10	P38204	145 aa		3.2	□□□□□ -1.9
snR11	snR11	QDR3	P38227	689 aa		3.2	□□□□□ -1.9
snR11	snR11	YAL037W	P39728	267 aa		3.2	□□□□□ -1.9
snR11	snR11	AIM20	P40451	204 aa		3.2	□□□□□ -1.9
snR11	snR11	YFR018C	P43599	363 aa		3.2	□□□□□ -1.9
snR11	snR11	PHO86	P46956	311 aa		3.2	□□□□□ -1.9
snR11	snR11	ASN2	P49090	572 aa	Known RBP	3.2	□□□□□ -1.9
snR11	snR11	MTM1	P53320	366 aa		3.2	□□□□□ -1.9
snR11	snR11	YGR266W	P53326	701 aa		3.2	□□□□□ -1.9
snR11	snR11	GPI15	P53961	229 aa		3.2	□□□□□ -1.9
snR11	snR11	STD1	Q02794	444 aa		3.2	□□□□□ -1.9
snR11	snR11	TAF12	Q03761	539 aa		3.2	□□□□□ -1.9
snR11	snR11	TMC1	Q08422	150 aa	Predicted RBP	3.2	□□□□□ -1.9
snR11	snR11	MRPL23	Q12487	163 aa	Predicted RBP	3.2	□□□□□ -1.9
snR11	snR11	CYC3	P06182	269 aa		3.19	□□□□□ -1.9
snR11	snR11	PUT4	P15380	627 aa		3.19	□□□□□ -1.9
snR11	snR11	RAD57	P25301	460 aa		3.19	□□□□□ -1.9
snR11	snR11	SMY1	P32364	656 aa	Known RBP	3.19	□□□□□ -1.9
snR11	snR11	KAR9	P32526	644 aa		3.19	□□□□□ -1.9
snR11	snR11	MNN9	P39107	395 aa	Known RBP	3.19	□□□□□ -1.9
snR11	snR11	PRM1	P53835	661 aa		3.19	□□□□□ -1.9
snR11	snR11	ARP5	P53946	755 aa		3.19	□□□□□ -1.9
snR11	snR11	YLR152C	P54072	576 aa		3.19	□□□□□ -1.9
snR11	snR11	RSN1	Q03516	953 aa		3.19	□□□□□ -1.9
snR11	snR11	YLH47	Q06493	454 aa		3.19	□□□□□ -1.9
snR11	snR11	YLR413W	Q06689	675 aa		3.19	□□□□□ -1.9
snR11	snR11	RRT8	Q08219	342 aa		3.19	□□□□□ -1.9
snR11	snR11	SPO12	P17123	173 aa		3.18	□□□□□ -1.9
snR11	snR11	PSO2	P30620	661 aa		3.18	□□□□□ -1.9
snR11	snR11	HXT1	P32465	570 aa		3.18	□□□□□ -1.9
snR11	snR11	IME2	P32581	645 aa		3.18	□□□□□ -1.9
snR11	snR11	MUD1	P32605	298 aa	Known RBP	3.18	□□□□□ -1.9
snR11	snR11	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
snR11	snR11	VPS45	P38932	577 aa		3.18	□□□□□ -1.9
snR11	snR11	SSO2	P39926	295 aa		3.18	□□□□□ -1.9
snR11	snR11	GAT2	P40209	560 aa		3.18	□□□□□ -1.9
snR11	snR11	YPS6	P40583	537 aa		3.18	□□□□□ -1.9
snR11	snR11	AGX1	P43567	385 aa		3.18	□□□□□ -1.9
snR11	snR11	GCD14	P46959	383 aa	Predicted RBP	3.18	□□□□□ -1.9
snR11	snR11	TIS11	P47977	285 aa		3.18	□□□□□ -1.9
snR11	snR11	PMT5	P52867	743 aa		3.18	□□□□□ -1.9
snR11	snR11	YGL185C	P53100	379 aa		3.18	□□□□□ -1.9
snR11	snR11	YGL039W	P53183	348 aa	Known RBP	3.18	□□□□□ -1.9
snR11	snR11	PNC1	P53184	216 aa	Known RBP	3.18	□□□□□ -1.9
snR11	snR11	RRN5	Q02983	363 aa		3.18	□□□□□ -1.9
snR11	snR11	GIP3	Q03016	1276 aa		3.18	□□□□□ -1.9
snR11	snR11	YDR541C	Q03049	344 aa		3.18	□□□□□ -1.9
snR11	snR11	BET5	Q03630	159 aa		3.18	□□□□□ -1.9
snR11	snR11	KAP95	Q06142	861 aa	Known RBP	3.18	□□□□□ -1.9
snR11	snR11	ECM7	Q06200	448 aa		3.18	□□□□□ -1.9
snR11	snR11	REX4	Q08237	289 aa		3.18	□□□□□ -1.9
snR11	snR11	SRL2	Q12020	392 aa		3.18	□□□□□ -1.9
snR11	snR11	RNH203	Q12338	110 aa		3.18	□□□□□ -1.9
snR11	snR11	OPI3	P05375	206 aa		3.17	□□□□□ -1.9
snR11	snR11	IMA3	P0CW40	589 aa		3.17	□□□□□ -1.9
snR11	snR11	IMA4	P0CW41	589 aa		3.17	□□□□□ -1.9
snR11	snR11	GCD2	P12754	651 aa	Predicted RBP	3.17	□□□□□ -1.9
snR11	snR11	GAL3	P13045	520 aa		3.17	□□□□□ -1.9
snR11	snR11	RVS161	P25343	265 aa	Known RBP	3.17	□□□□□ -1.9
snR11	snR11	YKL097C	P34245	136 aa		3.17	□□□□□ -1.9
snR11	snR11	PCF11	P39081	626 aa	Predicted RBP	3.17	□□□□□ -1.9
snR11	snR11	AZR1	P50080	613 aa		3.17	□□□□□ -1.9
snR11	snR11	CWC25	P53854	179 aa	Known RBP	3.17	□□□□□ -1.9
snR11	snR11	IMA2	Q08295	589 aa		3.17	□□□□□ -1.9
snR11	snR11	CDC37	P06101	506 aa	Known RBP	3.16	□□□□□ -1.9
snR11	snR11	MNS1	P32906	549 aa		3.16	□□□□□ -1.9
snR11	snR11	YUH1	P35127	236 aa		3.16	□□□□□ -1.9
snR11	snR11	OLA1	P38219	394 aa	Known RBP	3.16	□□□□□ -1.9
snR11	snR11	DED81	P38707	554 aa	Known RBP	3.16	□□□□□ -1.9
snR11	snR11	INM1	P38710	295 aa		3.16	□□□□□ -1.9
snR11	snR11	JLP2	P40206	208 aa		3.16	□□□□□ -1.9
snR11	snR11	TOS2	P50078	622 aa		3.16	□□□□□ -1.9
snR11	snR11	EGD1	Q02642	157 aa	Known RBP	3.16	□□□□□ -1.9
snR11	snR11	TLG1	Q03322	224 aa		3.16	□□□□□ -1.9
snR11	snR11	YPR078C	Q06813	372 aa		3.16	□□□□□ -1.9
snR11	snR11	NSE1	Q07913	336 aa		3.16	□□□□□ -1.9
snR11	snR11	BSC6	Q08280	497 aa		3.16	□□□□□ -1.9
snR11	snR11	SGT2	Q12118	346 aa	Known RBP	3.16	□□□□□ -1.9
snR11	snR11	SOD1	P00445	154 aa	Known RBP	3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms