RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
VAC7	YNL054W	UBA4	P38820	440 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	COA1	P40452	197 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	AGE2	P40529	298 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	PAM16	P42949	149 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	AAD10	P47182	288 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	ALT2	P52892	507 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	BOL2	P53082	120 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	IBD2	P53892	351 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	SIW14	P53965	281 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	TRS31	Q03337	283 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	YOR238W	Q08634	303 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	BMT6	Q12291	365 aa		4.06	□□□□□ -1.76
VAC7	YNL054W	HIS1	P00498	297 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	TRP4	P07285	380 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	PET54	P10834	293 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	FUN14	P18411	198 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	STE50	P25344	346 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YKU70	P32807	602 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MRPL11	P36521	249 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	MRP21	P38175	177 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MBA1	P38300	278 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	HAT2	P39984	401 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RRG9	P40156	214 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MAD2	P40958	196 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RPS10B	P46784	105 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	YGL159W	P53110	370 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	ERV29	P53337	310 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	AAD4	Q07747	329 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RRP40	Q08285	240 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	RPS10A	Q08745	105 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	SPC3	Q12133	184 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SIA1	Q12212	622 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	TIR4	Q12218	487 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	ZWF1	P11412	505 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	SEC12	P11655	471 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	COX11	P19516	300 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	VBA3	P25594	458 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YCR101C	P25607	182 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	TIP1	P27654	210 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	YKL151C	P36059	337 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YKR051W	P36142	418 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	FLO10	P36170	1169 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MRPL7	P36519	292 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SHM2	P37291	469 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	HSE1	P38753	452 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SEC28	P40509	296 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	PHB2	P50085	310 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YGL117W	P53133	265 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MPC1	P53157	130 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	SCW11	P53189	542 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	VOA1	P53262	265 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YAP1802	P53309	568 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YMR130W	Q04223	302 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	PAL1	Q05518	499 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	ARO10	Q06408	635 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	WTM1	Q12363	437 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	YDR461C-A	Q2V2P7	80 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YGR161W-C	Q3E744	92 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MPD2	Q99316	277 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SCEI	P03882	235 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	PMA1	P05030	918 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	PUT4	P15380	627 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VAC7	YNL054W	MRPL44	P19956	98 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	ARE1	P25628	610 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RSC6	P25632	483 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	ATG15	P25641	520 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YCR099C	P25657	155 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	AAR2	P32357	355 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	MSN2	P33748	704 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SOL2	P37262	315 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YBR238C	P38330	731 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	URA8	P38627	578 aa	Predicted RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	YEL025C	P39991	1188 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YER010C	P40011	234 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YJR111C	P47148	283 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	COG7	P53195	279 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YPR003C	P53394	754 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	BUD17	P53727	317 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YNR062C	P53748	327 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	YCL001W-A	P87012	153 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SNO1	Q03144	224 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	PLM2	Q04383	521 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RBS1	Q05672	457 aa	Known RBP	4.05	□□□□□ -1.76
VAC7	YNL054W	CUR1	Q06469	252 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	HDA2	Q06629	674 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	ASR1	Q06834	288 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	ENV9	Q08651	330 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	RMD5	Q12508	421 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	SRN2	Q99176	213 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	FLO11	P08640	1367 aa		4.05	□□□□□ -1.76
VAC7	YNL054W	CBP1	P07252	654 aa		4.04	□□□□□ -1.76
VAC7	YNL054W	PRB1	P09232	635 aa		4.04	□□□□□ -1.76
VAC7	YNL054W	SDH2	P21801	266 aa		4.04	□□□□□ -1.76
VAC7	YNL054W	GND1	P38720	489 aa	Known RBP	4.04	□□□□□ -1.76
VAC7	YNL054W	ERP2	P39704	215 aa		4.04	□□□□□ -1.76
VAC7	YNL054W	SSU1	P41930	458 aa		4.04	□□□□□ -1.76
VAC7	YNL054W	PFA3	P42836	336 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms