RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W RPC11Q04307 110 aaPredicted RBP1.8□□□□□ -2.12
HSH155YMR288W YML096WQ04489 525 aa1.8□□□□□ -2.12
HSH155YMR288W IVY1Q04934 453 aa1.8□□□□□ -2.12
HSH155YMR288W RTT103Q05543 409 aa1.8□□□□□ -2.12
HSH155YMR288W RBS1Q05672 457 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W BNA5Q05979 453 aa1.8□□□□□ -2.12
HSH155YMR288W YLR173WQ06247 608 aa1.8□□□□□ -2.12
HSH155YMR288W ATG29Q12092 213 aa1.8□□□□□ -2.12
HSH155YMR288W HUA2Q12134 243 aa1.8□□□□□ -2.12
HSH155YMR288W DFR1P07807 211 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
HSH155YMR288W YML003WP0CF16 290 aa1.8□□□□□ -2.12
HSH155YMR288W FUS3P16892 353 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W RPB8P20436 146 aa1.8□□□□□ -2.12
HSH155YMR288W CWP1P28319 239 aa1.8□□□□□ -2.12
HSH155YMR288W PRR1P28708 518 aa1.8□□□□□ -2.12
HSH155YMR288W ZIP1P31111 875 aa1.8□□□□□ -2.12
HSH155YMR288W GSH1P32477 678 aa1.8□□□□□ -2.12
HSH155YMR288W SRB5P32585 307 aa1.8□□□□□ -2.12
HSH155YMR288W PRS1P32895 427 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W YKL070WP36087 169 aa1.8□□□□□ -2.12
HSH155YMR288W SEC31P38968 1273 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W SER3P40054 469 aa1.8□□□□□ -2.12
HSH155YMR288W YER085CP40058 173 aa1.8□□□□□ -2.12
HSH155YMR288W URB2P47108 1174 aa1.8□□□□□ -2.12
HSH155YMR288W COQ5P49017 307 aa1.8□□□□□ -2.12
HSH155YMR288W SCW4P53334 386 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W MPS1P54199 764 aa1.8□□□□□ -2.12
HSH155YMR288W RPM2Q02773 1202 aa1.8□□□□□ -2.12
HSH155YMR288W YPL113CQ02961 396 aa1.8□□□□□ -2.12
HSH155YMR288W STE23Q06010 1027 aa1.8□□□□□ -2.12
HSH155YMR288W BRX1Q08235 291 aaKnown RBP1.8□□□□□ -2.12
HSH155YMR288W YOR387CQ08910 206 aa1.8□□□□□ -2.12
HSH155YMR288W MRPL23Q12487 163 aaPredicted RBP1.8□□□□□ -2.12
HSH155YMR288W CTF3Q12748 733 aa1.8□□□□□ -2.12
HSH155YMR288W THR4P16120 514 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W ALG1P16661 449 aa1.79□□□□□ -2.12
HSH155YMR288W APA2P22108 325 aa1.79□□□□□ -2.12
HSH155YMR288W UBA1P22515 1024 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W MAK32P23060 363 aa1.79□□□□□ -2.12
HSH155YMR288W YCL068CP25593 260 aa1.79□□□□□ -2.12
HSH155YMR288W ARO4P32449 370 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W HXT1P32465 570 aa1.79□□□□□ -2.12
HSH155YMR288W TKL2P33315 681 aa1.79□□□□□ -2.12
HSH155YMR288W CDC40P40968 455 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W YJL107CP42947 387 aa1.79□□□□□ -2.12
HSH155YMR288W PNC1P53184 216 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W YGR111WP53265 400 aa1.79□□□□□ -2.12
HSH155YMR288W YPR003CP53394 754 aa1.79□□□□□ -2.12
HSH155YMR288W SWS2P53937 143 aa1.79□□□□□ -2.12
HSH155YMR288W KAP120Q02932 1032 aa1.79□□□□□ -2.12
HSH155YMR288W SPO19Q03029 223 aa1.79□□□□□ -2.12
HSH155YMR288W ERV41Q04651 352 aa1.79□□□□□ -2.12
HSH155YMR288W YLR297WQ05899 129 aa1.79□□□□□ -2.12
HSH155YMR288W POS5Q06892 414 aa1.79□□□□□ -2.12
HSH155YMR288W YEH1Q07804 573 aa1.79□□□□□ -2.12
HSH155YMR288W ABP140Q08641 628 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
HSH155YMR288W PFK27Q12471 397 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W YPT6Q99260 215 aa1.79□□□□□ -2.12
HSH155YMR288W VPS63O13549 108 aa1.79□□□□□ -2.12
HSH155YMR288W ILV1P00927 576 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W MATALPHA2P0CY08 210 aa1.79□□□□□ -2.12
HSH155YMR288W HMLALPHA2P0CY09 210 aa1.79□□□□□ -2.12
HSH155YMR288W SRV2P17555 526 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W YPK2P18961 677 aa1.79□□□□□ -2.12
HSH155YMR288W CDC42P19073 191 aa1.79□□□□□ -2.12
HSH155YMR288W PRP2P20095 876 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W CNA1P23287 553 aa1.79□□□□□ -2.12
HSH155YMR288W LDB16P25587 256 aa1.79□□□□□ -2.12
HSH155YMR288W SUA5P32579 426 aa1.79□□□□□ -2.12
HSH155YMR288W NTR2P36118 322 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W AGP2P38090 596 aa1.79□□□□□ -2.12
HSH155YMR288W WSS1P38838 269 aa1.79□□□□□ -2.12
HSH155YMR288W SER33P40510 469 aa1.79□□□□□ -2.12
HSH155YMR288W SGN1P40561 250 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
HSH155YMR288W SCD6P45978 349 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
HSH155YMR288W ASG7P46993 209 aa1.79□□□□□ -2.12
HSH155YMR288W CGR1P53188 120 aa1.79□□□□□ -2.12
HSH155YMR288W MPP6P53725 186 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W ESBP6P53918 673 aa1.79□□□□□ -2.12
HSH155YMR288W BET4Q00618 327 aa1.79□□□□□ -2.12
HSH155YMR288W UTP6Q02354 440 aaKnown RBP1.79□□□□□ -2.12
HSH155YMR288W SMA2Q04658 369 aa1.79□□□□□ -2.12
HSH155YMR288W PRM6Q04705 352 aa1.79□□□□□ -2.12
HSH155YMR288W ECI1Q05871 280 aa1.79□□□□□ -2.12
HSH155YMR288W ATG26Q06321 1198 aa1.79□□□□□ -2.12
HSH155YMR288W CDD1Q06549 142 aa1.79□□□□□ -2.12
HSH155YMR288W RIM20Q12033 661 aa1.79□□□□□ -2.12
HSH155YMR288W TMS1Q12116 473 aa1.79□□□□□ -2.12
HSH155YMR288W YJR112W-AQ3E743 109 aa1.79□□□□□ -2.12
HSH155YMR288W TFB5Q3E7C1 72 aaPredicted RBP1.79□□□□□ -2.12
HSH155YMR288W NBL1Q3E7Y6 73 aa1.79□□□□□ -2.12
HSH155YMR288W NAG1Q8TGN9 163 aa1.79□□□□□ -2.12
HSH155YMR288W Q0010Q9ZZX9 128 aa1.79□□□□□ -2.12
HSH155YMR288W STT4P37297 1900 aa1.79□□□□□ -2.12
HSH155YMR288W MDM35O60200 86 aa1.78□□□□□ -2.12
HSH155YMR288W RPL6BP05739 176 aaKnown RBP1.78□□□□□ -2.12
HSH155YMR288W CDC36P06100 191 aaPredicted RBP1.78□□□□□ -2.12
HSH155YMR288W RSR1P13856 272 aa1.78□□□□□ -2.12
HSH155YMR288W SEC62P21825 274 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms