RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W NIC96P34077 839 aa3.62□□□□□ -1.83
ECM16YMR128W YKL077WP36081 392 aa3.62□□□□□ -1.83
ECM16YMR128W COS111P38308 924 aa3.62□□□□□ -1.83
ECM16YMR128W RCK1P38622 512 aa3.62□□□□□ -1.83
ECM16YMR128W TIM17P39515 158 aa3.62□□□□□ -1.83
ECM16YMR128W BUD13P46947 266 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W BNA1P47096 177 aa3.62□□□□□ -1.83
ECM16YMR128W JHD2P47156 728 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W MKC7P53379 596 aa3.62□□□□□ -1.83
ECM16YMR128W BRE5P53741 515 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W RPL6AQ02326 176 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W SSL1Q04673 461 aaPredicted RBP3.62□□□□□ -1.83
ECM16YMR128W AVO1Q08236 1176 aa3.62□□□□□ -1.83
ECM16YMR128W YPL245WQ12179 454 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W BAR1P12630 587 aa3.62□□□□□ -1.83
ECM16YMR128W YCR102CP25608 368 aa3.62□□□□□ -1.83
ECM16YMR128W PHO11P35842 467 aa3.62□□□□□ -1.83
ECM16YMR128W LDB7P38210 180 aa3.62□□□□□ -1.83
ECM16YMR128W PHO12P38693 467 aa3.62□□□□□ -1.83
ECM16YMR128W MTG2P38860 518 aa3.62□□□□□ -1.83
ECM16YMR128W PET100P38958 111 aa3.62□□□□□ -1.83
ECM16YMR128W TVP23P38962 199 aa3.62□□□□□ -1.83
ECM16YMR128W YER137CP40083 148 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W MNN5P46982 586 aa3.62□□□□□ -1.83
ECM16YMR128W HNT2P49775 206 aa3.62□□□□□ -1.83
ECM16YMR128W SHY1P53266 389 aa3.62□□□□□ -1.83
ECM16YMR128W CWC25P53854 179 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W YMR265CQ03508 461 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W PDR8Q06149 701 aa3.62□□□□□ -1.83
ECM16YMR128W DBP9Q06218 594 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W RPS21BQ3E754 87 aaKnown RBP3.62□□□□□ -1.83
ECM16YMR128W RAD52P06778 471 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W IDH2P28241 369 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W LHP1P33399 275 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W TAF14P35189 244 aa3.61□□□□□ -1.83
ECM16YMR128W GPT2P36148 743 aa3.61□□□□□ -1.83
ECM16YMR128W MNN2P38069 597 aa3.61□□□□□ -1.83
ECM16YMR128W FET3P38993 636 aa3.61□□□□□ -1.83
ECM16YMR128W FMP52P40008 231 aa3.61□□□□□ -1.83
ECM16YMR128W PAN6P40459 309 aa3.61□□□□□ -1.83
ECM16YMR128W GTS1P40956 396 aa3.61□□□□□ -1.83
ECM16YMR128W GLG2P47011 380 aa3.61□□□□□ -1.83
ECM16YMR128W AAT1Q01802 451 aa3.61□□□□□ -1.83
ECM16YMR128W ECM11Q04110 302 aa3.61□□□□□ -1.83
ECM16YMR128W ENT2Q05785 613 aa3.61□□□□□ -1.83
ECM16YMR128W ARV1Q06541 321 aa3.61□□□□□ -1.83
ECM16YMR128W IRC10Q08118 586 aa3.61□□□□□ -1.83
ECM16YMR128W YNG1Q08465 219 aa3.61□□□□□ -1.83
ECM16YMR128W RTC5Q12108 567 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W YRM1Q12340 786 aa3.61□□□□□ -1.83
ECM16YMR128W RTR2Q12378 196 aa3.61□□□□□ -1.83
ECM16YMR128W MPD2Q99316 277 aa3.61□□□□□ -1.83
ECM16YMR128W PRP2P20095 876 aaPredicted RBP3.61□□□□□ -1.83
ECM16YMR128W MF(ALPHA)2P32435 120 aa3.61□□□□□ -1.83
ECM16YMR128W MLH1P38920 769 aa3.61□□□□□ -1.83
ECM16YMR128W PHM8P40025 321 aa3.61□□□□□ -1.83
ECM16YMR128W RGI2P40188 164 aa3.61□□□□□ -1.83
ECM16YMR128W YFL052WP43551 465 aa3.61□□□□□ -1.83
ECM16YMR128W IMO32P53219 342 aa3.61□□□□□ -1.83
ECM16YMR128W ECM22Q05958 814 aaPredicted RBP3.61□□□□□ -1.83
ECM16YMR128W YDL073WQ07454 984 aa3.61□□□□□ -1.83
ECM16YMR128W YLL007CQ07799 665 aa3.61□□□□□ -1.83
ECM16YMR128W LDB18Q07887 179 aa3.61□□□□□ -1.83
ECM16YMR128W YOR387CQ08910 206 aa3.61□□□□□ -1.83
ECM16YMR128W RER1P25560 188 aa3.61□□□□□ -1.83
ECM16YMR128W YIM1P28625 365 aa3.61□□□□□ -1.83
ECM16YMR128W SNC1P31109 117 aa3.61□□□□□ -1.83
ECM16YMR128W HIS7P33734 552 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W EMC3P36039 253 aa3.61□□□□□ -1.83
ECM16YMR128W RRG9P40156 214 aa3.61□□□□□ -1.83
ECM16YMR128W OYE3P41816 400 aaPredicted RBP3.61□□□□□ -1.83
ECM16YMR128W PUS4P48567 403 aaKnown RBP3.61□□□□□ -1.83
ECM16YMR128W NQM1P53228 333 aaPredicted RBP3.61□□□□□ -1.83
ECM16YMR128W RRN5Q02983 363 aa3.61□□□□□ -1.83
ECM16YMR128W SNZ1Q03148 297 aa3.61□□□□□ -1.83
ECM16YMR128W ASM4Q05166 528 aa3.61□□□□□ -1.83
ECM16YMR128W COS7Q07788 383 aa3.61□□□□□ -1.83
ECM16YMR128W HCM1P25364 564 aa3.6□□□□□ -1.83
ECM16YMR128W PET309P32522 965 aaPredicted RBP3.6□□□□□ -1.83
ECM16YMR128W SHE3P38272 425 aaKnown RBP3.6□□□□□ -1.83
ECM16YMR128W EXO1P39875 702 aa3.6□□□□□ -1.83
ECM16YMR128W PZF1P39933 429 aa3.6□□□□□ -1.83
ECM16YMR128W DDI1P40087 428 aa3.6□□□□□ -1.83
ECM16YMR128W RET2P43621 546 aa3.6□□□□□ -1.83
ECM16YMR128W RAD17P48581 401 aa3.6□□□□□ -1.83
ECM16YMR128W MUP1P50276 574 aa3.6□□□□□ -1.83
ECM16YMR128W YNL134CP53912 376 aaKnown RBP3.6□□□□□ -1.83
ECM16YMR128W GCN5Q03330 439 aa3.6□□□□□ -1.83
ECM16YMR128W MSS11Q03825 758 aa3.6□□□□□ -1.83
ECM16YMR128W PKH2Q12236 1081 aaKnown RBP3.6□□□□□ -1.83
ECM16YMR128W MER1P16523 270 aa3.6□□□□□ -1.83
ECM16YMR128W CLB3P24870 427 aa3.6□□□□□ -1.83
ECM16YMR128W RMA1P36001 430 aaKnown RBP3.6□□□□□ -1.83
ECM16YMR128W SDH8P38345 138 aa3.6□□□□□ -1.83
ECM16YMR128W COQ6P53318 479 aa3.6□□□□□ -1.83
ECM16YMR128W CSL4P53859 292 aaPredicted RBP3.6□□□□□ -1.83
ECM16YMR128W Q0142Q9ZZW4 58 aa3.6□□□□□ -1.83
ECM16YMR128W SGV1P23293 657 aaKnown RBP3.6□□□□□ -1.83
ECM16YMR128W IDH1P28834 360 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
ECM16YMR128W DSS4P32601 143 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms