RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene SPC24, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC24	YMR117C	RPL12B	P0CX54	165 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	PRR1	P28708	518 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	HXT1	P32465	570 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	NUP2	P32499	720 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	MDL1	P33310	695 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	DOA1	P36037	715 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	BIR1	P47134	954 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	MST27	P53176	234 aa		4.25	□□□□□ -1.73
SPC24	YMR117C	HTZ1	Q12692	134 aa	Known RBP	4.25	□□□□□ -1.73
SPC24	YMR117C	OPI3	P05375	206 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	TPK3	P05986	398 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	ARF1	P11076	181 aa	Known RBP	4.24	□□□□□ -1.73
SPC24	YMR117C	AAT2	P23542	418 aa	Known RBP	4.24	□□□□□ -1.73
SPC24	YMR117C	RTC2	P38279	296 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	YHK8	P38776	514 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	COS1	P53822	381 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	MEH1	Q02205	184 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	TDA1	Q03533	586 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	URC2	Q04411	772 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	YOP1	Q12402	180 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	YCR024C-B	Q3E7Z8	88 aa		4.24	□□□□□ -1.73
SPC24	YMR117C	SSC1	P0CS90	654 aa	Known RBP	4.23	□□□□□ -1.73
SPC24	YMR117C	RAD5	P32849	1169 aa	Predicted RBP	4.23	□□□□□ -1.73
SPC24	YMR117C	MIG3	P39943	394 aa		4.23	□□□□□ -1.73
SPC24	YMR117C	PMT5	P52867	743 aa		4.23	□□□□□ -1.73
SPC24	YMR117C	RTT102	P53330	157 aa		4.23	□□□□□ -1.73
SPC24	YMR117C	ECM7	Q06200	448 aa		4.23	□□□□□ -1.73
SPC24	YMR117C	AAD15	Q08361	143 aa		4.23	□□□□□ -1.73
SPC24	YMR117C	PRS1	P32895	427 aa	Known RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	MCR1	P36060	302 aa	Known RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	KAP104	P38217	918 aa	Known RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	PFF1	P38244	976 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	MLH1	P38920	769 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	JEM1	P40358	645 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	SEC28	P40509	296 aa	Known RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	DFG10	P40526	253 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	ASN2	P49090	572 aa	Known RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	CLD1	P53264	445 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	TRM112	P53738	135 aa	Predicted RBP	4.22	□□□□□ -1.73
SPC24	YMR117C	HAL1	Q01766	294 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	SRN2	Q99176	213 aa		4.22	□□□□□ -1.73
SPC24	YMR117C	PCL1	P24867	279 aa		4.21	□□□□□ -1.74
SPC24	YMR117C	MNL1	P38888	796 aa		4.21	□□□□□ -1.74
SPC24	YMR117C	EGT2	P42835	1041 aa		4.21	□□□□□ -1.74
SPC24	YMR117C	TOS2	P50078	622 aa		4.21	□□□□□ -1.74
SPC24	YMR117C	ASA1	Q06822	443 aa		4.21	□□□□□ -1.74
SPC24	YMR117C	SPT10	P35208	640 aa		4.2	□□□□□ -1.74
SPC24	YMR117C	OXA1	P39952	402 aa		4.2	□□□□□ -1.74
SPC24	YMR117C	BNS1	P50084	137 aa		4.2	□□□□□ -1.74
SPC24	YMR117C	CRH1	P53301	507 aa		4.2	□□□□□ -1.74
SPC24	YMR117C	PUP2	P32379	260 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	GPX2	P38143	162 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	PTI1	P39927	425 aa	Predicted RBP	4.19	□□□□□ -1.74
SPC24	YMR117C	ATG18	P43601	500 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	RRN9	P53437	365 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	TSA2	Q04120	196 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	LIP2	Q06005	328 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	IPK1	Q06667	281 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	YDL114W	Q07530	308 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	LDS2	Q08218	356 aa		4.19	□□□□□ -1.74
SPC24	YMR117C	SOD1	P00445	154 aa	Known RBP	4.18	□□□□□ -1.74
SPC24	YMR117C	RRP7	P25368	297 aa	Predicted RBP	4.18	□□□□□ -1.74
SPC24	YMR117C	UTH1	P36135	365 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	GEP4	P38812	185 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	YNL208W	P40159	199 aa	Known RBP	4.18	□□□□□ -1.74
SPC24	YMR117C	MLC1	P53141	149 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	ERO1	Q03103	563 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	YPR091C	Q06833	770 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	NOP6	Q07623	225 aa	Known RBP	4.18	□□□□□ -1.74
SPC24	YMR117C	PCL9	Q12477	304 aa		4.18	□□□□□ -1.74
SPC24	YMR117C	NAT1	P12945	854 aa	Known RBP	4.17	□□□□□ -1.74
SPC24	YMR117C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SPC24	YMR117C	ANR2	P36090	516 aa	Predicted RBP	4.17	□□□□□ -1.74
SPC24	YMR117C	BAT1	P38891	393 aa	Known RBP	4.17	□□□□□ -1.74
SPC24	YMR117C	YIP5	P53108	310 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	YET2	Q04210	160 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	MFG1	Q07684	458 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	BSC6	Q08280	497 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	FCY22	Q12119	530 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	NAG1	Q8TGN9	163 aa		4.17	□□□□□ -1.74
SPC24	YMR117C	HSP82	P02829	709 aa	Known RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	RPL6B	P05739	176 aa	Known RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	RNA1	P11745	407 aa	Known RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	FUN26	P31381	517 aa		4.16	□□□□□ -1.74
SPC24	YMR117C	TOA2	P32774	122 aa		4.16	□□□□□ -1.74
SPC24	YMR117C	TIR2	P33890	251 aa		4.16	□□□□□ -1.74
SPC24	YMR117C	SPP381	P38282	291 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	GDT1	P38301	280 aa	Predicted RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	EPL1	P43572	832 aa		4.16	□□□□□ -1.74
SPC24	YMR117C	RPL6A	Q02326	176 aa	Known RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	RCF1	Q03713	159 aa		4.16	□□□□□ -1.74
SPC24	YMR117C	MEX67	Q99257	599 aa	Known RBP	4.16	□□□□□ -1.74
SPC24	YMR117C	ECM8	P38246	354 aa		4.15	□□□□□ -1.75
SPC24	YMR117C	WSS1	P38838	269 aa		4.15	□□□□□ -1.75
SPC24	YMR117C	YER186C	P40101	306 aa		4.15	□□□□□ -1.75
SPC24	YMR117C	AIP1	P46680	615 aa	Known RBP	4.15	□□□□□ -1.75
SPC24	YMR117C	YFH1	Q07540	174 aa		4.15	□□□□□ -1.75
SPC24	YMR117C	YDR061W	Q12298	539 aa		4.15	□□□□□ -1.75
SPC24	YMR117C	CDC50	P25656	391 aa		4.14	□□□□□ -1.75
SPC24	YMR117C	RXT2	P38255	430 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms