RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	RKM5	Q12367	367 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	ISN1	Q99312	450 aa		11.71	□□□□□ -0.54
BDF1	YLR399C	RPP1A	P05318	106 aa	Predicted RBP	11.7	□□□□□ -0.54
BDF1	YLR399C	SWI5	P08153	709 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	MSF1	P08425	469 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	MAG1	P22134	296 aa	Known RBP	11.7	□□□□□ -0.54
BDF1	YLR399C	ACP1	P32463	125 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	ISC10	P32645	267 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	MRPL36	P36531	177 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	LSM5	P40089	93 aa	Known RBP	11.7	□□□□□ -0.54
BDF1	YLR399C	FMC1	P40491	155 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	YGR067C	P53243	804 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	TDA1	Q03533	586 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	AIM32	Q04689	311 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	ESC8	Q08119	714 aa		11.7	□□□□□ -0.54
BDF1	YLR399C	RRP7	P25368	297 aa	Predicted RBP	11.69	□□□□□ -0.54
BDF1	YLR399C	RCY1	P39531	840 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	EAF6	P47128	113 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	YMR130W	Q04223	302 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	YLR173W	Q06247	608 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	MAS2	P11914	482 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	APA2	P22108	325 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
BDF1	YLR399C	SIF2	P38262	535 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	YHL041W	P38730	149 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	TES1	P41903	349 aa	Known RBP	11.69	□□□□□ -0.54
BDF1	YLR399C	UTP21	Q06078	939 aa	Predicted RBP	11.69	□□□□□ -0.54
BDF1	YLR399C	APC5	Q08683	685 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	CSR2	Q12734	1121 aa		11.69	□□□□□ -0.54
BDF1	YLR399C	RPS18A	P0CX55	146 aa	Known RBP	11.68	□□□□□ -0.54
BDF1	YLR399C	RPS18B	P0CX56	146 aa	Predicted RBP	11.68	□□□□□ -0.54
BDF1	YLR399C	MET8	P15807	274 aa		11.68	□□□□□ -0.54
BDF1	YLR399C	GCV1	P48015	400 aa		11.68	□□□□□ -0.54
BDF1	YLR399C	BUD17	P53727	317 aa		11.68	□□□□□ -0.54
BDF1	YLR399C	SFG1	Q12507	346 aa		11.68	□□□□□ -0.54
BDF1	YLR399C	YCP4	P25349	247 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	CTF8	P38877	133 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	SCS3	P53012	380 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	NAM8	Q00539	523 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	GIP3	Q03016	1276 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	DIN7	Q12086	430 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	RRP12	Q12754	1228 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	PCC1	Q3E833	88 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-LR4	P0C2I8	440 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-DR6	P0CX70	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-ER1	P0CX71	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-LR2	P0CX72	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-PL	P0CX73	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-JR1	P0CX74	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-LR3	P0CX75	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-ML2	P0CX76	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TMA19	P35691	167 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	SHE3	P38272	425 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	HXT5	P38695	592 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	PAM16	P42949	149 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	PET130	P47065	347 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	YJL016W	P47072	561 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	YPL113C	Q02961	396 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	EAR1	Q03212	550 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	YMR074C	Q04773	145 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	SPO77	Q06134	477 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-GR1	Q12085	440 aa		11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	TY1A-OL	Q92392	440 aa	Known RBP	11.67	□□□□□ -0.54
BDF1	YLR399C	FRS1	P15624	595 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	PET9	P18239	318 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	DCC1	P25559	380 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	ATP11	P32453	318 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	WBP1	P33767	430 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	FLR1	P38124	548 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	GND1	P38720	489 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	RFC4	P40339	323 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	HIS6	P40545	261 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	RPL10	P41805	221 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	QRI7	P43122	407 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	ROG1	P53118	685 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	YGR117C	P53270	476 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	RRP45	Q05636	305 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	YLR346C	Q06139	101 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	GAL2	P13181	574 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	RSA4	P25382	515 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	YCR087C-A	P37263	153 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	BMT2	P38278	337 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	PSA1	P41940	361 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	SNN1	P48232	102 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	HHO1	P53551	258 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	YNL034W	P53963	612 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	AAT1	Q01802	451 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	KAP120	Q02932	1032 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	RVB1	Q03940	463 aa	Known RBP	11.66	□□□□□ -0.54
BDF1	YLR399C	MHT1	Q12525	324 aa		11.66	□□□□□ -0.54
BDF1	YLR399C	SIS1	P25294	352 aa	Known RBP	11.65	□□□□□ -0.54
BDF1	YLR399C	YUR1	P26725	428 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	CDC12	P32468	407 aa	Known RBP	11.65	□□□□□ -0.54
BDF1	YLR399C	THI80	P35202	319 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	PKP1	P40530	394 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	YJR124C	P47159	448 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	VBA1	Q04301	562 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	VID22	Q05934	901 aa		11.65	□□□□□ -0.54
BDF1	YLR399C	RGT2	Q12300	763 aa		11.65	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms