RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W UIP4Q08926 304 aa4.76□□□□□ -1.65
MSH1YHR120W MMT2Q08970 484 aa4.76□□□□□ -1.65
MSH1YHR120W SLF1Q12034 447 aaKnown RBP4.76□□□□□ -1.65
MSH1YHR120W DST1P07273 309 aa4.75□□□□□ -1.65
MSH1YHR120W RPP1BP10622 106 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W GIT1P25346 518 aa4.75□□□□□ -1.65
MSH1YHR120W PET127P32606 800 aa4.75□□□□□ -1.65
MSH1YHR120W CLG1P35190 452 aa4.75□□□□□ -1.65
MSH1YHR120W ASC1P38011 319 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W ARN2P38724 620 aa4.75□□□□□ -1.65
MSH1YHR120W PFA5Q03289 374 aa4.75□□□□□ -1.65
MSH1YHR120W RSF1Q05043 376 aa4.75□□□□□ -1.65
MSH1YHR120W EMG1Q06287 252 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W YPR196WQ06595 470 aa4.75□□□□□ -1.65
MSH1YHR120W XYL2Q07993 356 aa4.75□□□□□ -1.65
MSH1YHR120W CDC31P06704 161 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W TY2A-LR1P0C2J4 438 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-FP0CX61 438 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-GR2P0CX62 438 aa4.75□□□□□ -1.65
MSH1YHR120W ENA1P13587 1091 aa4.75□□□□□ -1.65
MSH1YHR120W CHA1P25379 360 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W TY2A-CP25383 438 aa4.75□□□□□ -1.65
MSH1YHR120W PTC6P25646 442 aa4.75□□□□□ -1.65
MSH1YHR120W NTG1P31378 399 aa4.75□□□□□ -1.65
MSH1YHR120W HOC1P47124 396 aa4.75□□□□□ -1.65
MSH1YHR120W EFM3P47163 339 aa4.75□□□□□ -1.65
MSH1YHR120W ROG1P53118 685 aa4.75□□□□□ -1.65
MSH1YHR120W YNL181WP53878 407 aa4.75□□□□□ -1.65
MSH1YHR120W YNL140CP53910 189 aa4.75□□□□□ -1.65
MSH1YHR120W ENA2Q01896 1091 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-DR2Q03483 438 aa4.75□□□□□ -1.65
MSH1YHR120W NMD4Q12129 218 aa4.75□□□□□ -1.65
MSH1YHR120W YGK3Q12222 375 aaPredicted RBP4.75□□□□□ -1.65
MSH1YHR120W TY2A-BQ12260 438 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-OR2Q12293 438 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-DR1Q12392 438 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-OR1Q12439 438 aa4.75□□□□□ -1.65
MSH1YHR120W ENA5Q12691 1091 aa4.75□□□□□ -1.65
MSH1YHR120W TY2A-DR3Q99303 438 aa4.75□□□□□ -1.65
MSH1YHR120W MGR1P25573 417 aa4.75□□□□□ -1.65
MSH1YHR120W TAH1P25638 111 aaPredicted RBP4.75□□□□□ -1.65
MSH1YHR120W SUI1P32911 108 aaKnown RBP4.75□□□□□ -1.65
MSH1YHR120W SPO73P40031 143 aa4.75□□□□□ -1.65
MSH1YHR120W MPM1P40364 252 aa4.75□□□□□ -1.65
MSH1YHR120W NEO1P40527 1151 aa4.75□□□□□ -1.65
MSH1YHR120W PAC11P40960 533 aa4.75□□□□□ -1.65
MSH1YHR120W MEP2P41948 499 aa4.75□□□□□ -1.65
MSH1YHR120W SDT1P53078 280 aa4.75□□□□□ -1.65
MSH1YHR120W YGR012WP53206 393 aa4.75□□□□□ -1.65
MSH1YHR120W MET31Q03081 177 aa4.75□□□□□ -1.65
MSH1YHR120W PEX10Q05568 337 aa4.75□□□□□ -1.65
MSH1YHR120W BOP2Q06150 570 aa4.75□□□□□ -1.65
MSH1YHR120W RRT8Q08219 342 aa4.75□□□□□ -1.65
MSH1YHR120W REX4Q08237 289 aa4.75□□□□□ -1.65
MSH1YHR120W YOL131WQ08270 108 aa4.75□□□□□ -1.65
MSH1YHR120W YDL199CQ12407 687 aa4.75□□□□□ -1.65
MSH1YHR120W Q0010Q9ZZX9 128 aa4.75□□□□□ -1.65
MSH1YHR120W RHB1P25378 209 aa4.74□□□□□ -1.65
MSH1YHR120W YCR087C-AP37263 153 aa4.74□□□□□ -1.65
MSH1YHR120W RCK1P38622 512 aa4.74□□□□□ -1.65
MSH1YHR120W PRM10P42946 383 aa4.74□□□□□ -1.65
MSH1YHR120W JHD2P47156 728 aaPredicted RBP4.74□□□□□ -1.65
MSH1YHR120W BIO3P50277 480 aa4.74□□□□□ -1.65
MSH1YHR120W CWC23P52868 283 aaPredicted RBP4.74□□□□□ -1.65
MSH1YHR120W MON1P53129 644 aa4.74□□□□□ -1.65
MSH1YHR120W PEX25Q02969 394 aa4.74□□□□□ -1.65
MSH1YHR120W YLR345WQ06137 509 aa4.74□□□□□ -1.65
MSH1YHR120W PDR8Q06149 701 aa4.74□□□□□ -1.65
MSH1YHR120W PUS9Q12069 462 aa4.74□□□□□ -1.65
MSH1YHR120W PNS1Q12412 539 aa4.74□□□□□ -1.65
MSH1YHR120W YPR064WQ12492 139 aa4.74□□□□□ -1.65
MSH1YHR120W YPR096CO13587 100 aa4.74□□□□□ -1.65
MSH1YHR120W RAS2P01120 322 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W HTA1P04911 132 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W CDC4P07834 779 aa4.74□□□□□ -1.65
MSH1YHR120W MXR2P25566 168 aa4.74□□□□□ -1.65
MSH1YHR120W CMK1P27466 446 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W NTA1P40354 457 aa4.74□□□□□ -1.65
MSH1YHR120W YIL152WP40455 235 aa4.74□□□□□ -1.65
MSH1YHR120W RPL10P41805 221 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W RAI1P53063 387 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W YGR168CP53293 376 aa4.74□□□□□ -1.65
MSH1YHR120W CPR8P53728 308 aa4.74□□□□□ -1.65
MSH1YHR120W ERG13P54839 491 aaKnown RBP4.74□□□□□ -1.65
MSH1YHR120W YPS7Q06325 596 aa4.74□□□□□ -1.65
MSH1YHR120W YLR125WQ12138 136 aa4.74□□□□□ -1.65
MSH1YHR120W GLO4Q12320 285 aa4.74□□□□□ -1.65
MSH1YHR120W YBR056W-AI2HB52 66 aa4.73□□□□□ -1.65
MSH1YHR120W SLM5P25345 492 aaKnown RBP4.73□□□□□ -1.65
MSH1YHR120W LDB16P25587 256 aa4.73□□□□□ -1.65
MSH1YHR120W RPS27AP35997 82 aaKnown RBP4.73□□□□□ -1.65
MSH1YHR120W OMA1P36163 345 aa4.73□□□□□ -1.65
MSH1YHR120W RPS27BP38711 82 aa4.73□□□□□ -1.65
MSH1YHR120W RPS17AP02407 136 aaKnown RBP4.73□□□□□ -1.65
MSH1YHR120W RPS17BP14127 136 aaKnown RBP4.73□□□□□ -1.65
MSH1YHR120W PRI2P20457 528 aa4.73□□□□□ -1.65
MSH1YHR120W GRR1P24814 1151 aa4.73□□□□□ -1.65
MSH1YHR120W YMC1P32331 307 aa4.73□□□□□ -1.65
MSH1YHR120W SPT14P32363 452 aa4.73□□□□□ -1.65
MSH1YHR120W KAP122P32767 1081 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms