RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C AHC2P25649 128 aa3□□□□□ -1.93
RPN1YHR027C COQ3P27680 312 aa3□□□□□ -1.93
RPN1YHR027C BEM3P32873 1128 aa3□□□□□ -1.93
RPN1YHR027C LIP5P32875 414 aa3□□□□□ -1.93
RPN1YHR027C PRS3P38689 320 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C ARN1P38731 627 aa3□□□□□ -1.93
RPN1YHR027C SLZ1P40167 298 aa3□□□□□ -1.93
RPN1YHR027C YJL218WP40892 196 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C RPL10P41805 221 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C PHO86P46956 311 aa3□□□□□ -1.93
RPN1YHR027C DIA3P52290 468 aa3□□□□□ -1.93
RPN1YHR027C YGR042WP53227 271 aa3□□□□□ -1.93
RPN1YHR027C SLX9P53251 210 aaPredicted RBP3□□□□□ -1.93
RPN1YHR027C YGR127WP53275 312 aa3□□□□□ -1.93
RPN1YHR027C TIM13P53299 105 aa3□□□□□ -1.93
RPN1YHR027C MKC7P53379 596 aa3□□□□□ -1.93
RPN1YHR027C CUS2P53830 285 aaPredicted RBP3□□□□□ -1.93
RPN1YHR027C LSM7P53905 115 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C KTR6P54070 446 aa3□□□□□ -1.93
RPN1YHR027C GPD1Q00055 391 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C NUP49Q02199 472 aa3□□□□□ -1.93
RPN1YHR027C NUP116Q02630 1113 aa3□□□□□ -1.93
RPN1YHR027C YMR209CQ03648 457 aa3□□□□□ -1.93
RPN1YHR027C TRS130Q03660 1102 aa3□□□□□ -1.93
RPN1YHR027C DOT1Q04089 582 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C NHX1Q04121 633 aa3□□□□□ -1.93
RPN1YHR027C HOF1Q05080 669 aa3□□□□□ -1.93
RPN1YHR027C FRQ1Q06389 190 aa3□□□□□ -1.93
RPN1YHR027C SYT1Q06836 1226 aa3□□□□□ -1.93
RPN1YHR027C YRR1Q12172 810 aa3□□□□□ -1.93
RPN1YHR027C HOS1Q12214 470 aa3□□□□□ -1.93
RPN1YHR027C PNO1Q99216 274 aaKnown RBP3□□□□□ -1.93
RPN1YHR027C SLH1P53327 1967 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C RPP2AP05319 106 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C RPL9AP05738 191 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C ERR1P0CX10 437 aa2.99□□□□□ -1.93
RPN1YHR027C ERR2P0CX11 437 aa2.99□□□□□ -1.93
RPN1YHR027C SPO7P18410 259 aa2.99□□□□□ -1.93
RPN1YHR027C NAR1P23503 491 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C PRE7P23724 241 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C RNA14P25298 677 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C PEX34P25584 144 aa2.99□□□□□ -1.93
RPN1YHR027C PEX4P29340 183 aa2.99□□□□□ -1.93
RPN1YHR027C EMP24P32803 203 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C RAD54P32863 898 aa2.99□□□□□ -1.93
RPN1YHR027C MRPL6P32904 214 aa2.99□□□□□ -1.93
RPN1YHR027C YPT7P32939 208 aa2.99□□□□□ -1.93
RPN1YHR027C MSN2P33748 704 aa2.99□□□□□ -1.93
RPN1YHR027C TSA1P34760 196 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C AHP1P38013 176 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C MAP2P38174 421 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C YBR053CP38235 358 aa2.99□□□□□ -1.93
RPN1YHR027C YMR144WP40214 342 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C SNM1P40993 198 aa2.99□□□□□ -1.93
RPN1YHR027C ERR3P42222 437 aa2.99□□□□□ -1.93
RPN1YHR027C GAT1P43574 510 aa2.99□□□□□ -1.93
RPN1YHR027C SSY5P47002 699 aa2.99□□□□□ -1.93
RPN1YHR027C VPS70P47161 811 aa2.99□□□□□ -1.93
RPN1YHR027C ARH1P48360 493 aa2.99□□□□□ -1.93
RPN1YHR027C AMA1P50082 593 aa2.99□□□□□ -1.93
RPN1YHR027C RPL9BP51401 191 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C ACS2P52910 683 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C NBP35P52920 328 aa2.99□□□□□ -1.93
RPN1YHR027C TDA1Q03533 586 aa2.99□□□□□ -1.93
RPN1YHR027C RKM2Q03942 479 aa2.99□□□□□ -1.93
RPN1YHR027C SSK1Q07084 712 aa2.99□□□□□ -1.93
RPN1YHR027C IZH3Q07959 543 aa2.99□□□□□ -1.93
RPN1YHR027C RAD28Q12021 506 aa2.99□□□□□ -1.93
RPN1YHR027C YDL176WQ12027 708 aa2.99□□□□□ -1.93
RPN1YHR027C NMD4Q12129 218 aa2.99□□□□□ -1.93
RPN1YHR027C YPL245WQ12179 454 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C YLR046CQ12253 270 aa2.99□□□□□ -1.93
RPN1YHR027C RKM5Q12367 367 aa2.99□□□□□ -1.93
RPN1YHR027C CMR1Q12510 522 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C MHF1Q3E835 90 aa2.99□□□□□ -1.93
RPN1YHR027C MDM12Q92328 271 aa2.99□□□□□ -1.93
RPN1YHR027C HBN1Q96VH4 193 aa2.99□□□□□ -1.93
RPN1YHR027C CKA1P15790 372 aa2.99□□□□□ -1.93
RPN1YHR027C RPL8AP17076 256 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C IDP1P21954 428 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C YCR102CP25608 368 aa2.99□□□□□ -1.93
RPN1YHR027C TAH1P25638 111 aaPredicted RBP2.99□□□□□ -1.93
RPN1YHR027C IDH1P28834 360 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
RPN1YHR027C RPL8BP29453 256 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C SNC1P31109 117 aa2.99□□□□□ -1.93
RPN1YHR027C CAT2P32796 670 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C RMA1P36001 430 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C TAT1P38085 619 aa2.99□□□□□ -1.93
RPN1YHR027C DTR1P38125 572 aa2.99□□□□□ -1.93
RPN1YHR027C RCK1P38622 512 aa2.99□□□□□ -1.93
RPN1YHR027C YHR054CP38780 354 aa2.99□□□□□ -1.93
RPN1YHR027C SHU2P38957 223 aa2.99□□□□□ -1.93
RPN1YHR027C FET3P38993 636 aa2.99□□□□□ -1.93
RPN1YHR027C YJR111CP47148 283 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C HXT16P47185 567 aa2.99□□□□□ -1.93
RPN1YHR027C YGR273CP53329 174 aa2.99□□□□□ -1.93
RPN1YHR027C BRE5P53741 515 aaKnown RBP2.99□□□□□ -1.93
RPN1YHR027C SNO1Q03144 224 aa2.99□□□□□ -1.93
RPN1YHR027C PRM6Q04705 352 aa2.99□□□□□ -1.93
RPN1YHR027C Q0144Q9ZZW2 109 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 108.9 ms