RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 XKR9Q5GH70 373 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 CATSPER3Q86XQ3 398 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 C4orf19Q8IY42 314 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 AFAP1L1Q8TED9 768 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-220ENST00000641570 LARP4BQ92615 738 aaKnown RBP14.45□□□□□ -0.1
PHGDH-220ENST00000641570 CEP170P1Q96L14 293 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 TUT1Q9H6E5 874 aaKnown RBP14.45□□□□□ -0.1
PHGDH-220ENST00000641570 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
PHGDH-220ENST00000641570 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 HBP1O60381 514 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 LGR5O75473 907 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 SLITRK3O94933 977 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 ATG7O95352 703 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 CST5P28325 142 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-220ENST00000641570 NDUFA8P51970 172 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-220ENST00000641570 LRRC41Q15345 812 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 MTFR1Q15390 333 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 KCNA10Q16322 511 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 MTERF2Q49AM1 385 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 ATP8B4Q8TF62 1192 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 TSEN34Q9BSV6 310 aaKnown RBP14.44□□□□□ -0.1
PHGDH-220ENST00000641570 PAK6Q9NQU5 681 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-220ENST00000641570 ANKEF1Q9NU02 776 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 PPME1Q9Y570 386 aa14.44□□□□□ -0.1
PHGDH-220ENST00000641570 DOCK3Q8IZD9 2030 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-220ENST00000641570 DNM1LO00429 736 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 ADCY6O43306 1168 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 GADD45BO75293 160 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TBCAO75347 108 aaKnown RBP14.43□□□□□ -0.1
PHGDH-220ENST00000641570 ZNF202O95125 648 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 EYA4O95677 639 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 ASGR1P07306 291 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 GJB1P08034 283 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 PLA2G4BP0C869 781 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TMOD1P28289 359 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 PSEN2P49810 448 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 IGBP1P78318 339 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TBC1D8BQ0IIM8 1120 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 PPFIA1Q13136 1202 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 KIAA0753Q2KHM9 967 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TMEM63BQ5T3F8 832 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 B3GNT9Q6UX72 402 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 TRIM50Q86XT4 487 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 PIGOQ8TEQ8 1089 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 U2AF1L4Q8WU68 220 aaKnown RBP14.43□□□□□ -0.1
PHGDH-220ENST00000641570 RAD54LQ92698 747 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 HSD17B14Q9BPX1 270 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 BHMT2Q9H2M3 363 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 BCAS3Q9H6U6 928 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 STARD7Q9NQZ5 370 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 LMBRD1Q9NUN5 540 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 MAFBQ9Y5Q3 323 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-220ENST00000641570 MCM3APO60318 1980 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 KIAA1217Q5T5P2 1943 aa14.43□□□□□ -0.1
PHGDH-220ENST00000641570 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 ADAMTS4O75173 837 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 SMC2O95347 1197 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 LYPLA2O95372 231 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 SGPL1O95470 568 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 F2P00734 622 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 XRCC6P12956 609 aaKnown RBP eCLIP14.42□□□□□ -0.15e-6■■□□□ 11.5
PHGDH-220ENST00000641570 PTGS1P23219 599 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 DNM2P50570 870 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 PURAQ00577 322 aaKnown RBP14.42□□□□□ -0.1
PHGDH-220ENST00000641570 GRB10Q13322 594 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 ZNF484Q5JVG2 852 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 HYIQ5T013 277 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 CXCL17Q6UXB2 119 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 TNMDQ9H2S6 317 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 ATP6V0A4Q9HBG4 840 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 KCND2Q9NZV8 630 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 DBR1Q9UK59 544 aaKnown RBP14.42□□□□□ -0.1
PHGDH-220ENST00000641570 PCNTO95613 3336 aa14.42□□□□□ -0.1
PHGDH-220ENST00000641570 IGKV6D-21A0A0A0MT36 114 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-220ENST00000641570 C17orf102A2RUQ5 167 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 E9PMD0 336 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 CTAGE5O15320 804 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
PHGDH-220ENST00000641570 MYL1P05976 194 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 RFC5P40937 340 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 ACLYP53396 1101 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 UGCGQ16739 394 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
PHGDH-220ENST00000641570 MCPH1Q8NEM0 835 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms