RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ZNF713Q8N859 430 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-213ENST00000641272 PPP1R16BQ96T49 567 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 GINS2Q9Y248 185 aa19.04■□□□□ 0.64
PHGDH-213ENST00000641272 POTEB3A0JP26 581 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 FAM86B1E9PN63 330 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 FAM86B2P0C5J1 330 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 PAK2Q13177 524 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 TMEM266Q2M3C6 531 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 POTEBQ6S5H4 581 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 BRF1Q92994 677 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 JAKMIP1Q96N16 626 aaKnown RBP19.03■□□□□ 0.64
PHGDH-213ENST00000641272 CLDND1Q9NY35 253 aa19.03■□□□□ 0.64
PHGDH-213ENST00000641272 EVPLQ92817 2033 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 SCG2P13521 617 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 SSTR3P32745 418 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-213ENST00000641272 GATMP50440 423 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 CLUL1Q15846 466 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 IER5Q5VY09 327 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 Q6ZUG5 572 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 TRMT1LQ7Z2T5 733 aaKnown RBP19.02■□□□□ 0.64
PHGDH-213ENST00000641272 RASGRP4Q8TDF6 673 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 C11orf84Q9BUA3 381 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-213ENST00000641272 PADI3Q9ULW8 664 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 PCDHA2Q9Y5H9 948 aa19.02■□□□□ 0.64
PHGDH-213ENST00000641272 MRPL42Q9Y6G3 142 aaKnown RBP19.02■□□□□ 0.64
PHGDH-213ENST00000641272 IGSF9BQ9UPX0 1349 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 PLXNA4Q9HCM2 1894 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 MEIS1O00470 390 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 BMPR1AP36894 532 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 PFKFB3Q16875 520 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-213ENST00000641272 TSGA10IPQ3SY00 556 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 MTHFD1LQ6UB35 978 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 PLPPR4Q7Z2D5 763 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 FAM178BQ8IXR5 827 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 PHKBQ93100 1093 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 LRFN3Q9BTN0 628 aa19.01■□□□□ 0.63
PHGDH-213ENST00000641272 MYH9P35579 1960 aaKnown RBP19.01■□□□□ 0.63
PHGDH-213ENST00000641272 WDR81Q562E7 1941 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 IGLV3-22A0A075B6J6 115 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 C5orf67F2Z3F1 127 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 DGKIO75912 1065 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 FAM160B1Q5W0V3 765 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 PDXDC2PQ6P474 469 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 RTN4RL1Q86UN2 441 aaPredicted RBP19■□□□□ 0.63
PHGDH-213ENST00000641272 NEK9Q8TD19 979 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 ATP8B4Q8TF62 1192 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 ZNF689Q96CS4 500 aaPredicted RBP19■□□□□ 0.63
PHGDH-213ENST00000641272 PABPC5Q96DU9 382 aaKnown RBP19■□□□□ 0.63
PHGDH-213ENST00000641272 CELF4Q9BZC1 486 aaKnown RBP19■□□□□ 0.63
PHGDH-213ENST00000641272 ALG13Q9NP73 1137 aaKnown RBP19■□□□□ 0.63
PHGDH-213ENST00000641272 C11orf16Q9NQ32 467 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 ZNF302Q9NR11 478 aa19■□□□□ 0.63
PHGDH-213ENST00000641272 SMIM35A0A1B0GVV1 85 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 GRXCR2A6NFK2 248 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 KLRC1P26715 233 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 GTF2F1P35269 517 aaKnown RBP eCLIP18.99■□□□□ 0.63
PHGDH-213ENST00000641272 KRT76Q01546 638 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 HYAL1Q12794 435 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 NFX1Q12986 1120 aaKnown RBP18.99■□□□□ 0.63
PHGDH-213ENST00000641272 TMEM31Q5JXX7 168 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 BLOC1S2Q6QNY1 142 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 ABHD15Q6UXT9 468 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 NPAS4Q8IUM7 802 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 CKAP2LQ8IYA6 745 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 GJD3Q8N144 294 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 REXO1Q8N1G1 1221 aaKnown RBP18.99■□□□□ 0.63
PHGDH-213ENST00000641272 CLP1Q92989 425 aaKnown RBP18.99■□□□□ 0.63
PHGDH-213ENST00000641272 GLT8D2Q9H1C3 349 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 TMX1Q9H3N1 280 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 RWDD3Q9Y3V2 267 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 SNX14Q9Y5W7 946 aa18.99■□□□□ 0.63
PHGDH-213ENST00000641272 FNDC1Q4ZHG4 1894 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-213ENST00000641272 NID2Q14112 1375 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 IGKV6D-21A0A0A0MT36 114 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 IPO5O00410 1097 aaKnown RBP18.98■□□□□ 0.63
PHGDH-213ENST00000641272 MGEA5O60502 916 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 ATG7O95352 703 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 RPLP2P05387 115 aaKnown RBP18.98■□□□□ 0.63
PHGDH-213ENST00000641272 RB1P06400 928 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 HMGB1P09429 215 aaKnown RBP18.98■□□□□ 0.63
PHGDH-213ENST00000641272 RCAN1P53805 252 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 PKN1Q16512 942 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 NIPA1Q7RTP0 329 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 TMEM40Q8WWA1 233 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 TNPO1Q92973 898 aaKnown RBP18.98■□□□□ 0.63
PHGDH-213ENST00000641272 ZNF577Q9BSK1 485 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 FTHL17Q9BXU8 183 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 IGFLR1Q9H665 355 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 CDHR5Q9HBB8 845 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 TCEAL9Q9UHQ7 104 aa18.98■□□□□ 0.63
PHGDH-213ENST00000641272 ESYT2A0FGR8 921 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 LINC01565O15544 149 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 DHX15O43143 795 aaKnown RBP18.97■□□□□ 0.63
PHGDH-213ENST00000641272 HBP1O60381 514 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 MMP1P03956 469 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 ATP4AP20648 1035 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 SLC26A2P50443 739 aa18.97■□□□□ 0.63
PHGDH-213ENST00000641272 DLX2Q07687 328 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms