RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 PON1P27169 355 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 SLC20A2Q08357 652 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 KCNA1Q09470 495 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 CERKLQ49MI3 558 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
C11orf54-215ENST00000617482 CYP2W1Q8TAV3 490 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
C11orf54-215ENST00000617482 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CLIC2O15247 247 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 RAD51CO43502 376 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 XRCC5P13010 732 aaKnown RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CASP4P49662 377 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 PAK2Q13177 524 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 RPS6KA1Q15418 735 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CFAP58Q5T655 872 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 DPY19L2P1Q6NXN4 242 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 FRMD5Q7Z6J6 570 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 SYT2Q8N9I0 419 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 USP38Q8NB14 1042 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 RBM46Q8TBY0 533 aaKnown RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 TAF4BQ92750 862 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 GJD4Q96KN9 370 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CCDC17Q96LX7 622 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 GLT8D2Q9H1C3 349 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 FAM170AA1A519 330 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 ZNF233A6NK53 670 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CLSTN1O94985 981 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 RPA1P27694 616 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 HOXA13P31271 388 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 RBM5P52756 815 aaKnown RBP eCLIP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 CORO7P57737 925 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 NNTQ13423 1086 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 ALKBH5Q6P6C2 394 aaKnown RBP12.92□□□□□ -0.34
C11orf54-215ENST00000617482 GJB7Q6PEY0 223 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 SLC30A10Q6XR72 485 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 KIAA0825Q8IV33 1275 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 SEPT12Q8IYM1 358 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 IQCKQ8N0W5 287 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 IKZF4Q9H2S9 585 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 TRAF3IP3Q9Y228 551 aa12.92□□□□□ -0.34
C11orf54-215ENST00000617482 EIF3HO15372 352 aaKnown RBP eCLIP12.91□□□□□ -0.34
C11orf54-215ENST00000617482 CEP104O60308 925 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 GCNT3O95395 438 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 MAGEA9P43362 315 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 CRKP46108 304 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 LENG9Q96B70 501 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 RGL1Q9NZL6 768 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 AJAP1Q9UKB5 411 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-215ENST00000617482 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 GRIN2DO15399 1336 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 SPDYE3A6NKU9 549 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 F5H6K3 240 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 GDF11O95390 407 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 KLRC3Q07444 240 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 PDCLQ13371 301 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 EPM2AIP1Q7L775 607 aaPredicted RBP12.91□□□□□ -0.34
C11orf54-215ENST00000617482 DCAF4Q8WV16 495 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 PIK3R5Q8WYR1 880 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 AMNQ9BXJ7 453 aa12.91□□□□□ -0.34
C11orf54-215ENST00000617482 KLRG2A4D1S0 409 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-215ENST00000617482 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
C11orf54-215ENST00000617482 ZEB2O60315 1214 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 KIF4AO95239 1232 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 NR3C1P04150 777 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 POLD1P28340 1107 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 AP3B2Q13367 1082 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
C11orf54-215ENST00000617482 PIGOQ8TEQ8 1089 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 MKL1Q969V6 931 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 PLCB1Q9NQ66 1216 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 PDXKO00764 312 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 MSH4O15457 936 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 ZNF76P36508 570 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 TNNC1P63316 161 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 ICA1Q05084 483 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 EPHA7Q15375 998 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 FBXO11Q86XK2 927 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
C11orf54-215ENST00000617482 BZW2Q9Y6E2 419 aaKnown RBP12.9□□□□□ -0.34
C11orf54-215ENST00000617482 ASTN1O14525 1302 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms