RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ZMYM3Q14202 1370 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 B4E1Z4 1266 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 PLA2G1BP04054 148 aaKnown RBP5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 ASLP04424 464 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 TSPY4P0CV99 314 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 TSPY10P0CW01 314 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 CYP2C8P10632 490 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRT15P19012 456 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 IGFALSP35858 605 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 NKX3-2P78367 333 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 TEPPQ6URK8 271 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KCTD1Q719H9 257 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 OVCH1Q7RTY7 1134 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KIAA0907Q7Z7F0 614 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 NLGN4XQ8N0W4 816 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 IGSF22Q8N9C0 903 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 TTLL11Q8NHH1 800 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 NINJ1Q92982 152 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 DACT3Q96B18 629 aaPredicted RBP5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 NOX5Q96PH1 765 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 FEZ1Q99689 392 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRTAP4-12Q9BQ66 201 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 SYT3Q9BQG1 590 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 SMURF1Q9HCE7 757 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 HSPBP1Q9NZL4 362 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 SRPK3Q9UPE1 567 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 TNPO3Q9Y5L0 923 aaKnown RBP5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 MYO3AQ8NEV4 1616 aa5.19□□□□□ -1.58
CKS1BP3-201ENST00000600888 KDM5DQ9BY66 1539 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PTPRKQ15262 1439 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 FGD6Q6ZV73 1430 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZNF561-AS1K7EIQ3 104 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 MAN2B1O00754 1011 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 OPA1O60313 960 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 HTRA3P83110 453 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZNF460Q14592 562 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PAN2Q504Q3 1202 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PLEKHG4Q58EX7 1191 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 DALRD3Q5D0E6 543 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 SDE2Q6IQ49 451 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZCCHC8Q6NZY4 707 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PTRH1Q86Y79 214 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 C1QL4Q86Z23 238 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 LRRC56Q8IYG6 542 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 CISD2Q8N5K1 135 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 FNIP1Q8TF40 1166 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 GORASP1Q9BQQ3 440 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PCDH18Q9HCL0 1135 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 INTS7Q9NVH2 962 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 SAMD15Q9P1V8 674 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 MAGEC2Q9UBF1 373 aaPredicted RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 PMF1-BGLAPU3KQ54 211 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 CFAP65Q6ZU64 1925 aaKnown RBP5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 DEPDC5O75140 1603 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 MROH1Q8NDA8 1641 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 DUOX2Q9NRD8 1548 aa5.18□□□□□ -1.58
CKS1BP3-201ENST00000600888 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 ACOT7O00154 380 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 FAHP16930 419 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 AFF3P51826 1226 aaKnown RBP5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 CAP1Q01518 475 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 TMEM177Q53S58 311 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 BTBD8Q5XKL5 378 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 HHIPL2Q6UWX4 724 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 EP400NLQ6ZTU2 488 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 DDX53Q86TM3 631 aaKnown RBP5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 STK32CQ86UX6 486 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 TMEM151BQ8IW70 566 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 NIM1KQ8IY84 436 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 ZSCAN18Q8TBC5 510 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 C11orf84Q9BUA3 381 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 ATP23Q9Y6H3 246 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 CEP152O94986 1710 aa5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 POLR1AO95602 1720 aaPredicted RBP5.17□□□□□ -1.58
CKS1BP3-201ENST00000600888 CEP170BQ9Y4F5 1589 aaPredicted RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PTPRTO14522 1441 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 ABCC5O15440 1437 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 DAPK1P53355 1430 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 ERBINQ96RT1 1412 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PZPP20742 1482 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PLA2R1Q13018 1463 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 FAM90A27PA6NNH2 459 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 M0R2C6 588 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 KCNK3O14649 394 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 KIF3BO15066 747 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 CLASP2O75122 1294 aaKnown RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 GLRX3O76003 335 aaKnown RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 JMJD7P0C870 316 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 PTPN1P18031 435 aaKnown RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 HSD3B2P26439 372 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 FLT3P36888 993 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 MECP2P51608 486 aaKnown RBP5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 HSPA2P54652 639 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 ITGA1P56199 1179 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 FIGNQ5HY92 759 aa5.16□□□□□ -1.58
CKS1BP3-201ENST00000600888 TCERG1LQ5VWI1 586 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms