RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 PTGDRQ13258 359 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 GDF6Q6KF10 455 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-212ENST00000587197 SWSAP1Q6NVH7 229 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 OTOP2Q7RTS6 562 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 CCDC60Q8IWA6 550 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-212ENST00000587197 PPP1R13LQ8WUF5 828 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 FAM161BQ96MY7 647 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 SEMA6BQ9H3T3 888 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 TTC12Q9H892 705 aaPredicted RBP19.42■□□□□ 0.7
DNMT1-212ENST00000587197 ZNF302Q9NR11 478 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 SAMM50Q9Y512 469 aa19.42■□□□□ 0.7
DNMT1-212ENST00000587197 DOCK5Q9H7D0 1870 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 CHMP2AO43633 222 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 PARNO95453 639 aaKnown RBP19.41■□□□□ 0.7
DNMT1-212ENST00000587197 DNAJB2P25686 324 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 EPHA7Q15375 998 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 PDXDC2PQ6P474 469 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 CEP131Q9UPN4 1083 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 IGSF9BQ9UPX0 1349 aa19.41■□□□□ 0.7
DNMT1-212ENST00000587197 EML1O00423 815 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 BRD1O95696 1058 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 IQCF3P0C7M6 154 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 FXR2P51116 673 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■■□□ 18.5
DNMT1-212ENST00000587197 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
DNMT1-212ENST00000587197 RAB30Q15771 203 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 ARL6IP4Q66PJ3 421 aaKnown RBP19.4■□□□□ 0.7
DNMT1-212ENST00000587197 DEFB128Q7Z7B8 93 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 RNPEPQ9H4A4 650 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 GABBR1Q9UBS5 961 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 MSRAQ9UJ68 235 aa19.4■□□□□ 0.7
DNMT1-212ENST00000587197 MORC2Q9Y6X9 1032 aaPredicted RBP19.4■□□□□ 0.7
DNMT1-212ENST00000587197 ZBBXA8MT70 800 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 HBP1O60381 514 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 DKC1O60832 514 aaKnown RBP eCLIP19.39■□□□□ 0.69
DNMT1-212ENST00000587197 F13A1P00488 732 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 P4HBP07237 508 aaKnown RBP19.39■□□□□ 0.69
DNMT1-212ENST00000587197 SMIM10L2AP0DMW4 78 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 SMIM10L2BP0DMW5 78 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 GNAT1P11488 350 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 PTK7Q13308 1070 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 PKP1Q13835 747 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 PDIA5Q14554 519 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 PLCB4Q15147 1175 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 NEK9Q8TD19 979 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 ATP8B4Q8TF62 1192 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 ATP6V0A1Q93050 837 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 TIFAQ96CG3 184 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 FAM167AQ96KS9 214 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
DNMT1-212ENST00000587197 SLC4A7Q9Y6M7 1214 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 NRCAMQ92823 1304 aa19.39■□□□□ 0.69
DNMT1-212ENST00000587197 LAMA3Q16787 3333 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 POTEB3A0JP26 581 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 SELPP16109 830 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 ATP4AP20648 1035 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 MARK3P27448 753 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 PSMC5P62195 406 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 TMEM266Q2M3C6 531 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 POTEBQ6S5H4 581 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 BBXQ8WY36 941 aaPredicted RBP19.38■□□□□ 0.69
DNMT1-212ENST00000587197 GUCD1Q96NT3 240 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 RAB34Q9BZG1 259 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 STK24Q9Y6E0 443 aa19.38■□□□□ 0.69
DNMT1-212ENST00000587197 C17orf102A2RUQ5 167 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 RRN3P2A6NIE6 340 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 ZNF862O60290 1169 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 DDIT3P35638 169 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 TECP42680 631 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 QARSP47897 775 aaKnown RBP19.37■□□□□ 0.69
DNMT1-212ENST00000587197 ADAM17P78536 824 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 RBL2Q08999 1139 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 PPFIA1Q13136 1202 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
DNMT1-212ENST00000587197 ATL3Q6DD88 541 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 NCAPH2Q6IBW4 605 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 DTHD1Q6ZMT9 781 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 LRRC8DQ7L1W4 858 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 IGSF22Q8N9C0 903 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 CDX2Q99626 313 aaPredicted RBP19.37■□□□□ 0.69
DNMT1-212ENST00000587197 HSD17B14Q9BPX1 270 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 PBX4Q9BYU1 374 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 TTYH1Q9H313 450 aaPredicted RBP19.37■□□□□ 0.69
DNMT1-212ENST00000587197 NRBP2Q9NSY0 501 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 CXXC1Q9P0U4 656 aaPredicted RBP19.37■□□□□ 0.69
DNMT1-212ENST00000587197 SZT2Q5T011 3432 aa19.37■□□□□ 0.69
DNMT1-212ENST00000587197 MBLAC1A4D2B0 266 aaPredicted RBP19.36■□□□□ 0.69
DNMT1-212ENST00000587197 INSRRP14616 1297 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 PTPAQ15257 358 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 UGCGQ16739 394 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 ZNF484Q5JVG2 852 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 FAM173BQ6P4H8 233 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 C4orf19Q8IY42 314 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 ZNF396Q96N95 335 aaPredicted RBP19.36■□□□□ 0.69
DNMT1-212ENST00000587197 EIF2AK1Q9BQI3 630 aaKnown RBP19.36■□□□□ 0.69
DNMT1-212ENST00000587197 ZNF576Q9H609 170 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 ZSWIM4Q9H7M6 989 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 DAXXQ9UER7 740 aaPredicted RBP19.36■□□□□ 0.69
DNMT1-212ENST00000587197 TRPC6Q9Y210 931 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 CLIC4Q9Y696 253 aa19.36■□□□□ 0.69
DNMT1-212ENST00000587197 COL1A2P08123 1366 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms