RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 AGO3Q9H9G7 860 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 CYP26B1Q9NR63 512 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 C1orf112Q9NSG2 853 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 DZANK1Q9NVP4 752 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 ERAP1Q9NZ08 941 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 DUSP12Q9UNI6 340 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SUPT16HQ9Y5B9 1047 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 PCDHA1Q9Y5I3 950 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 TRPV2Q9Y5S1 764 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 HCFC2Q9Y5Z7 792 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 R4GN57 208 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 FAM186AA6NE01 2351 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 ZMYM6O95789 1325 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 TTC41PQ6P2S7 1318 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 IGSF9BQ9UPX0 1349 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 DENND3A2RUS2 1198 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 MBLAC1A4D2B0 266 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 RRN3P2A6NIE6 340 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 SPDYE4A6NLX3 237 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 GCOM1H8Y6P7 765 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 FOXP2O15409 715 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 PI15O43692 258 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 KINO60870 393 aaKnown RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 EOMESO95936 686 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 PARP1P09874 1014 aaKnown RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 POLR2MP0CAP2 368 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 MARK3P27448 753 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 HOXA13P31271 388 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 TCF7P36402 384 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 GATMP50440 423 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 PLCB3Q01970 1234 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 APOBRQ0VD83 1088 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 TDGQ13569 410 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 SMC1AQ14683 1233 aaKnown RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 ATAT1Q5SQI0 421 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 ODR4Q5SWX8 454 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 XRRA1Q6P2D8 792 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 MFSD6Q6ZSS7 791 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 CCDC149Q6ZUS6 474 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 TMC7Q7Z402 723 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 TMEM87AQ8NBN3 555 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 GIMAP8Q8ND71 665 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 IL31RAQ8NI17 732 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 RIN2Q8WYP3 895 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 SECISBP2LQ93073 1101 aaKnown RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 INPP4AQ96PE3 977 aaPredicted RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 ERVK-5Q9HDB9 667 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 ZBTB40Q9NUA8 1239 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 NCDNQ9UBB6 729 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 LIMD1Q9UGP4 676 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 CDH22Q9UJ99 828 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 CDV3Q9UKY7 258 aaKnown RBP6.81□□□□□ -1.32
SMG6-219ENST00000575663 PADI3Q9ULW8 664 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 GVINP1Q7Z2Y8 2422 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 CACNA1BQ00975 2339 aa6.81□□□□□ -1.32
SMG6-219ENST00000575663 HIDE1A8MVS5 230 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 PRR5-ARHGAP8B1AHC4 643 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 SPATA31C2B4DYI2 1134 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 OPLAHO14841 1288 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ZBTB5O15062 677 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 HOXA2O43364 376 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 NPR3P17342 541 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 PDE4AP27815 886 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 IGBP1P78318 339 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ARHGAP8P85298 464 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 LMNB2Q03252 620 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 TBC1D8BQ0IIM8 1120 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 NONOQ15233 471 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMG6-219ENST00000575663 ALX1Q15699 326 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 RARS2Q5T160 578 aaKnown RBP6.8□□□□□ -1.32
SMG6-219ENST00000575663 RIF1Q5UIP0 2472 aaKnown RBP6.8□□□□□ -1.32
SMG6-219ENST00000575663 VPS53Q5VIR6 699 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 OTOP3Q7RTS5 596 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 NLRX1Q86UT6 975 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 FCHSD1Q86WN1 690 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ABI1Q8IZP0 508 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 LRRC43Q8N309 656 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 GLG1Q92896 1179 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 BORCS6Q96GS4 357 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 CHAMP1Q96JM3 812 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ZFP91Q96JP5 570 aaPredicted RBP6.8□□□□□ -1.32
SMG6-219ENST00000575663 ZNF558Q96NG5 402 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 SENP7Q9BQF6 1050 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ZKSCAN3Q9BRR0 538 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 JMJD4Q9H9V9 463 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 ATP6V0A4Q9HBG4 840 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 VAT1LQ9HCJ6 419 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 TYW1Q9NV66 732 aaKnown RBP6.8□□□□□ -1.32
SMG6-219ENST00000575663 DMXL1Q9Y485 3027 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 KIAA1217Q5T5P2 1943 aa6.8□□□□□ -1.32
SMG6-219ENST00000575663 KDM3AQ9Y4C1 1321 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 MYO7AQ13402 2215 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 SPTLC1O15269 473 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 RPS6KA5O75582 802 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 FGAP02671 866 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 KCNA4P22459 653 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 HAND2P61296 217 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 DMWDQ09019 674 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 TMEM62Q0P6H9 643 aa6.79□□□□□ -1.32
SMG6-219ENST00000575663 NFX1Q12986 1120 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms