RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 RIC8AQ9NPQ8 531 aa23.84■■□□□ 1.41
HERC2-204ENST00000563945 RNF216Q9NWF9 866 aaPredicted RBP23.84■■□□□ 1.41
HERC2-204ENST00000563945 PLAGL2Q9UPG8 496 aa23.84■■□□□ 1.41
HERC2-204ENST00000563945 TTC3P53804 2025 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 POTEB3A0JP26 581 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 BACH1O14867 736 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 SLC26A2P50443 739 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 KRT76Q01546 638 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 NECTIN1Q15223 517 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 CTC1Q2NKJ3 1217 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 PAN2Q504Q3 1202 aaKnown RBP23.83■■□□□ 1.41
HERC2-204ENST00000563945 CEP55Q53EZ4 464 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 FAM160B1Q5W0V3 765 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 WWC2Q6AWC2 1192 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 PPP1R18Q6NYC8 613 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 POTEBQ6S5H4 581 aa23.83■■□□□ 1.41
HERC2-204ENST00000563945 MRPL42Q9Y6G3 142 aaKnown RBP23.83■■□□□ 1.41
HERC2-204ENST00000563945 SMIM35A0A1B0GVV1 85 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 LINC00271P0C7V0 271 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 ARP10275 920 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 SCG2P13521 617 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 LTBRP36941 435 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 NDUFV1P49821 464 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 NFX1Q12986 1120 aaKnown RBP23.82■■□□□ 1.4
HERC2-204ENST00000563945 RTN1Q16799 776 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 ODR4Q5SWX8 454 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 SPOUT1Q5T280 376 aaKnown RBP23.82■■□□□ 1.4
HERC2-204ENST00000563945 RTN4RL1Q86UN2 441 aaPredicted RBP23.82■■□□□ 1.4
HERC2-204ENST00000563945 CYP2W1Q8TAV3 490 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 TRAPPC12Q8WVT3 735 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 ANO3Q9BYT9 981 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 CD207Q9UJ71 328 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 GINS2Q9Y248 185 aa23.82■■□□□ 1.4
HERC2-204ENST00000563945 V9GY48 417 aaPredicted RBP23.82■■□□□ 1.4
HERC2-204ENST00000563945 SMCO2A6NFE2 343 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 hCG_1984214I3L0E3 225 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 ZBTB43O43298 467 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 MBTPS2O43462 519 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 SMAD2Q15796 467 aaKnown RBP23.81■■□□□ 1.4
HERC2-204ENST00000563945 FAM43BQ6ZT52 329 aaPredicted RBP23.81■■□□□ 1.4
HERC2-204ENST00000563945 ZNF713Q8N859 430 aaPredicted RBP23.81■■□□□ 1.4
HERC2-204ENST00000563945 PGBD1Q96JS3 809 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 NEK1Q96PY6 1258 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 AGO4Q9HCK5 861 aaKnown RBP23.81■■□□□ 1.4
HERC2-204ENST00000563945 IGSF9BQ9UPX0 1349 aa23.81■■□□□ 1.4
HERC2-204ENST00000563945 C19orf67A6NJJ6 358 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 HBP1O60381 514 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 KLRC1P26715 233 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 SMAD4Q13485 552 aaKnown RBP23.8■■□□□ 1.4
HERC2-204ENST00000563945 APOA5Q6Q788 366 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 MTHFD1LQ6UB35 978 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 LINC01599Q8WXQ3 324 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 NAP1L2Q9ULW6 460 aaPredicted RBP23.8■■□□□ 1.4
HERC2-204ENST00000563945 PCDHB7Q9Y5E2 793 aa23.8■■□□□ 1.4
HERC2-204ENST00000563945 DDX39AO00148 427 aaKnown RBP23.79■■□□□ 1.4
HERC2-204ENST00000563945 MEIS1O00470 390 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 DLX2Q07687 328 aaPredicted RBP23.79■■□□□ 1.4
HERC2-204ENST00000563945 AP3B2Q13367 1082 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 ADAM15Q13444 863 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 COL9A3Q14050 684 aaPredicted RBP23.79■■□□□ 1.4
HERC2-204ENST00000563945 KLHL23Q8NBE8 558 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 SPPL3Q8TCT6 385 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 MICAL1Q8TDZ2 1067 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 AAASQ9NRG9 546 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 TCEAL9Q9UHQ7 104 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 CNTNAP5Q8WYK1 1306 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 KDM3AQ9Y4C1 1321 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 MUC6Q6W4X9 2439 aa23.79■■□□□ 1.4
HERC2-204ENST00000563945 DENND3A2RUS2 1198 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 STXBP3O00186 592 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 RPS6KA5O75582 802 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 ITGB1P05556 798 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 GTF2F1P35269 517 aaKnown RBP eCLIP23.78■■□□□ 1.4
HERC2-204ENST00000563945 IRS1P35568 1242 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 FGD1P98174 961 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 ITGB3BPQ13352 177 aaPredicted RBP23.78■■□□□ 1.4
HERC2-204ENST00000563945 CKAP2LQ8IYA6 745 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 POF1BQ8WVV4 589 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 PCDHB12Q9Y5F1 795 aa23.78■■□□□ 1.4
HERC2-204ENST00000563945 GOLGA8AA7E2F4 631 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 GOLGA8BA8MQT2 603 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 LINC01565O15544 149 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 PPFIA3O75145 1194 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 ATG7O95352 703 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 SREBF1P36956 1147 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 SARSP49591 514 aaKnown RBP23.77■■□□□ 1.4
HERC2-204ENST00000563945 TMEM266Q2M3C6 531 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 ZNF484Q5JVG2 852 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 MIS18BP1Q6P0N0 1132 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 PDXDC2PQ6P474 469 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 DHX32Q7L7V1 743 aaKnown RBP23.77■■□□□ 1.4
HERC2-204ENST00000563945 PLA2G4DQ86XP0 818 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 ATP8B4Q8TF62 1192 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 ZNF302Q9NR11 478 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 TMEM260Q9NX78 707 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 BARHL2Q9NY43 387 aa23.77■■□□□ 1.4
HERC2-204ENST00000563945 GPR182O15218 404 aa23.76■■□□□ 1.39
HERC2-204ENST00000563945 TYW1BQ6NUM6 668 aa23.76■■□□□ 1.39
HERC2-204ENST00000563945 NIPA1Q7RTP0 329 aa23.76■■□□□ 1.39
HERC2-204ENST00000563945 RBM23Q86U06 439 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms