RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 FAM109BQ6ICB4 259 aaPredicted RBP13.64□□□□□ -0.23
USP8-212ENST00000560730 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 MIER3Q7Z3K6 550 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 RPUSD2Q8IZ73 545 aaKnown RBP13.64□□□□□ -0.23
USP8-212ENST00000560730 ATP8B4Q8TF62 1192 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
USP8-212ENST00000560730 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
USP8-212ENST00000560730 TCEAL9Q9UHQ7 104 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 SMC3Q9UQE7 1217 aa13.64□□□□□ -0.23
USP8-212ENST00000560730 IGSF9BQ9UPX0 1349 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 GBF1Q92538 1859 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 TBX3O15119 743 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 HBP1O60381 514 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 CTSHP09668 335 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.231e-6■■■■■ 28.8
USP8-212ENST00000560730 SFNP31947 248 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 RFC2P35250 354 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 PSRC1Q6PGN9 363 aaPredicted RBP13.63□□□□□ -0.23
USP8-212ENST00000560730 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
USP8-212ENST00000560730 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 LAMA3Q16787 3333 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 RSPH10B2B2RC85 870 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 RSPH10BP0C881 870 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 KLRC1P26715 233 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 MCM7P33993 719 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 SPIRE1Q08AE8 756 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 PPP2R5CQ13362 524 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
USP8-212ENST00000560730 NBR1Q14596 966 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 ZNF174Q15697 407 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 MTHFD1LQ6UB35 978 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 RDM1Q8NG50 284 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 DNAJB3Q8WWF6 145 aa13.62□□□□□ -0.23
USP8-212ENST00000560730 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP8-212ENST00000560730 PTPRSQ13332 1948 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 GRXCR1A8MXD5 290 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 MARCH6O60337 910 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 NEMFO60524 1076 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 STBD1O95210 358 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 CHRNA1P02708 482 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 CXCL10P02778 98 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 TOB1P50616 345 aaPredicted RBP13.61□□□□□ -0.23
USP8-212ENST00000560730 PRKCEQ02156 737 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 CALCRLQ16602 461 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 ZNF484Q5JVG2 852 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 BANK1Q8NDB2 785 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
USP8-212ENST00000560730 MTMR9Q96QG7 549 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
USP8-212ENST00000560730 KIF3AQ9Y496 699 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.61□□□□□ -0.23
USP8-212ENST00000560730 PCDHA2Q9Y5H9 948 aa13.61□□□□□ -0.23
USP8-212ENST00000560730 TMEM150BA6NC51 233 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
USP8-212ENST00000560730 OATP04181 439 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 PFKMP08237 780 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 TXKP42681 527 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 MGAT3Q09327 533 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 TTC38Q5R3I4 469 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 LARP1BQ659C4 914 aaKnown RBP13.6□□□□□ -0.23
USP8-212ENST00000560730 MCTP1Q6DN14 999 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 TAF2Q6P1X5 1199 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 RPAINQ86UA6 219 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 SLFN12Q8IYM2 578 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
USP8-212ENST00000560730 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 WRAP73Q9P2S5 460 aaPredicted RBP13.6□□□□□ -0.23
USP8-212ENST00000560730 MICAL3Q7RTP6 2002 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 COL1A2P08123 1366 aa13.6□□□□□ -0.23
USP8-212ENST00000560730 ZBBXA8MT70 800 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 CAND2O75155 1236 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 C22orf31O95567 290 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 KIAA0319LQ8IZA0 1049 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 SH2D3AQ9BRG2 576 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
USP8-212ENST00000560730 NRBP2Q9NSY0 501 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 RGL1Q9NZL6 768 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 PCDHA12Q9UN75 941 aa13.59□□□□□ -0.23
USP8-212ENST00000560730 LAMA2P24043 3122 aaKnown RBP13.59□□□□□ -0.23
USP8-212ENST00000560730 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 SMIM35A0A1B0GVV1 85 aa13.58□□□□□ -0.24
USP8-212ENST00000560730 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.24
USP8-212ENST00000560730 H3BQV1 296 aa13.58□□□□□ -0.24
USP8-212ENST00000560730 K7ELQ4 463 aaPredicted RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 PARNO95453 639 aaKnown RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 PSMC5P62195 406 aa13.58□□□□□ -0.24
USP8-212ENST00000560730 MRPS6P82932 125 aaKnown RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 SMAD3P84022 425 aaKnown RBP13.58□□□□□ -0.24
USP8-212ENST00000560730 EPHA7Q15375 998 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms