RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PCDHA2Q9Y5H9 948 aa15.27■□□□□ 0.04
TPM1-215ENST00000558868 DNAJC25-GNG10A0A024R161 153 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 N4BP3O15049 544 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 ITGBL1O95965 494 aaPredicted RBP15.26■□□□□ 0.03
TPM1-215ENST00000558868 CCNE2O96020 404 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
TPM1-215ENST00000558868 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
TPM1-215ENST00000558868 RAD51AP2Q09MP3 1159 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 NEDD9Q14511 834 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 KRT31Q15323 416 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 WDR78Q5VTH9 848 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 SPECC1LQ69YQ0 1117 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 APTXQ7Z2E3 356 aaKnown RBP15.26■□□□□ 0.03
TPM1-215ENST00000558868 ABRAQ8N0Z2 381 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 SEMA6BQ9H3T3 888 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 PARVGQ9HBI0 331 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
TPM1-215ENST00000558868 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
TPM1-215ENST00000558868 LCTP09848 1927 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 TRPM7Q96QT4 1865 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 UBE4BO95155 1302 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 ASB14A6NK59 587 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 EIF3DO15371 548 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM1-215ENST00000558868 STRNO43815 780 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 PEX10O60683 326 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 COBLO75128 1261 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 CYP2C8P10632 490 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 SFPQP23246 707 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM1-215ENST00000558868 YWHABP31946 246 aaKnown RBP15.25■□□□□ 0.03
TPM1-215ENST00000558868 HUNKP57058 714 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 FKBP3Q00688 224 aaKnown RBP15.25■□□□□ 0.03
TPM1-215ENST00000558868 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
TPM1-215ENST00000558868 FSTL1Q12841 308 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 CCDC144BQ3MJ40 725 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 PADI6Q6TGC4 694 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 SFR1Q86XK3 245 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 LRRC8AQ8IWT6 810 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 MYCT1Q8N699 235 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
TPM1-215ENST00000558868 MRPL44Q9H9J2 332 aaKnown RBP15.25■□□□□ 0.03
TPM1-215ENST00000558868 WRAP73Q9P2S5 460 aaPredicted RBP15.25■□□□□ 0.03
TPM1-215ENST00000558868 ITIH6Q6UXX5 1313 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 MANSC4A6NHS7 340 aaPredicted RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 ZNF500O60304 480 aaPredicted RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 GNA14O95837 355 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 TPM1P09493 284 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 MAPTP10636 758 aaKnown RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 RARRES1P49788 294 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 ZNF131P52739 623 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 ACTR2P61160 394 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 ALCAMQ13740 583 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 LRRC41Q15345 812 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 BMT2Q1RMZ1 405 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 CST9Q5W186 159 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 ABHD15Q6UXT9 468 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 EPM2AIP1Q7L775 607 aaPredicted RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 IRF2BP1Q8IU81 584 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 CREBRFQ8IUR6 639 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 SLC17A8Q8NDX2 589 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 MORC4Q8TE76 937 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 CNOT6LQ96LI5 555 aaKnown RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 ZNF830Q96NB3 372 aaPredicted RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.24■□□□□ 0.03
TPM1-215ENST00000558868 TBC1D7Q9P0N9 293 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■□□ 19.1
TPM1-215ENST00000558868 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
TPM1-215ENST00000558868 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 ASTN1O14525 1302 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 CALUO43852 315 aaPredicted RBP15.23■□□□□ 0.03
TPM1-215ENST00000558868 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
TPM1-215ENST00000558868 TRIM14Q14142 442 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 KNOP1Q1ED39 458 aaKnown RBP15.23■□□□□ 0.03
TPM1-215ENST00000558868 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 XKR9Q5GH70 373 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 PPFIBP1Q86W92 1011 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 CCDC112Q8NEF3 446 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 ZNF507Q8TCN5 953 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 CACTINQ8WUQ7 758 aaKnown RBP15.23■□□□□ 0.03
TPM1-215ENST00000558868 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 DRC1Q96MC2 740 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 VPS16Q9H269 839 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 KCNF1Q9H3M0 494 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 TAB2Q9NYJ8 693 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 LARSQ9P2J5 1176 aaKnown RBP15.23■□□□□ 0.03
TPM1-215ENST00000558868 GABBR1Q9UBS5 961 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
TPM1-215ENST00000558868 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 RSPH10B2B2RC85 870 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 PDXKO00764 312 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 ZBTB39O15060 712 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 HIP1RO75146 1068 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 ATG7O95352 703 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 GCNT3O95395 438 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 PGK2P07205 417 aa15.22■□□□□ 0.03
TPM1-215ENST00000558868 RSPH10BP0C881 870 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms