RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 HSP90AA1P07900 732 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 ATP4AP20648 1035 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 ADAM17P78536 824 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 TRIM71Q2Q1W2 868 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 MARCH8Q5T0T0 291 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 B3GNT9Q6UX72 402 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 RDM1Q8NG50 284 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 RNPC3Q96LT9 517 aaKnown RBP17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.84■□□□□ 0.451e-8■□□□□ 9.7
RABGGTA-206ENST00000558649 FAM49AQ9H0Q0 323 aaPredicted RBP17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 TMEM60Q9H2L4 133 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 A0A1W2PPC1 479 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 ZNF862O60290 1169 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 HBP1O60381 514 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 OATP04181 439 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 PSRC1Q6PGN9 363 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 C16orf59Q7L2K0 433 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 BBXQ8WY36 941 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 INTS4Q96HW7 963 aaKnown RBP17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 FAM167AQ96KS9 214 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 FTOQ9C0B1 505 aaKnown RBP eCLIP17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 PCDHA12Q9UN75 941 aa17.83■□□□□ 0.44
RABGGTA-206ENST00000558649 SIP14410 1827 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 PDCP20941 246 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 TRAPPC10P48553 1259 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 RBL2Q08999 1139 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 TMEM240Q5SV17 173 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 OTOP2Q7RTS6 562 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 FERMT3Q86UX7 667 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 DNAJB3Q8WWF6 145 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 SEPT9Q9UHD8 586 aaPredicted RBP17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 PCDHB6Q9Y5E3 794 aa17.82■□□□□ 0.44
RABGGTA-206ENST00000558649 COL1A2P08123 1366 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 MBLAC1A4D2B0 266 aaPredicted RBP17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 TMEM150BA6NC51 233 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 POTEMA6NI47 508 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 RSPH10B2B2RC85 870 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 FGBP02675 491 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 OR52Z1P0C646 297 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 RSPH10BP0C881 870 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 RFC2P35250 354 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 SPIRE1Q08AE8 756 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 ZNF484Q5JVG2 852 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 TAF2Q6P1X5 1199 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 RSPH3Q86UC2 560 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 DYDC2Q96IM9 177 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 NRBP2Q9NSY0 501 aa17.81■□□□□ 0.44
RABGGTA-206ENST00000558649 ZBBXA8MT70 800 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 ZBTB42B2RXF5 422 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 KLRC1P26715 233 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 PSMC5P62195 406 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 TMEM62Q0P6H9 643 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 ORC2Q13416 577 aaPredicted RBP17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 TRAF7Q6Q0C0 670 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 SH2D3AQ9BRG2 576 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 LXNQ9BS40 222 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 RGL1Q9NZL6 768 aa17.8■□□□□ 0.44
RABGGTA-206ENST00000558649 ARID2Q68CP9 1835 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 DDX11L8A8MPP1 907 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 NBNO60934 754 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 C22orf31O95567 290 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 P4HBP07237 508 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 PFKMP08237 780 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 SYT1P21579 422 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 TECP42680 631 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 QARSP47897 775 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 CTTNQ14247 550 aaKnown RBP17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 EPHA7Q15375 998 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 MTERF2Q49AM1 385 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 RILPL1Q5EBL4 403 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 PLA2G4FQ68DD2 849 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 METTL13Q8N6R0 699 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 VWCEQ96DN2 955 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 WRAP73Q9P2S5 460 aaPredicted RBP17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 CEP131Q9UPN4 1083 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 PCDHA2Q9Y5H9 948 aa17.79■□□□□ 0.44
RABGGTA-206ENST00000558649 EVPLQ92817 2033 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 SOX1O00570 391 aaPredicted RBP17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 CAND2O75155 1236 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 MRPS6P82932 125 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 PTGDRQ13258 359 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 XKR3Q5GH77 459 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 TPH2Q8IWU9 490 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 EIF2AK1Q9BQI3 630 aaKnown RBP17.78■□□□□ 0.44
RABGGTA-206ENST00000558649 LOXHD1Q8IVV2 1947 aa17.77■□□□□ 0.44
RABGGTA-206ENST00000558649 SMIM35A0A1B0GVV1 85 aa17.77■□□□□ 0.44
RABGGTA-206ENST00000558649 M0QZ92 97 aa17.77■□□□□ 0.44
RABGGTA-206ENST00000558649 DKC1O60832 514 aaKnown RBP eCLIP17.77■□□□□ 0.44
RABGGTA-206ENST00000558649 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms