RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CKBP12277 381 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 FPGSQ05932 587 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 GPNMBQ14956 572 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 EPHA7Q15375 998 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 BRAPQ7Z569 592 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 TMEM199Q8N511 208 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 FOXD4L1Q9NU39 408 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 TUBE1Q9UJT0 475 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 TRPC6Q9Y210 931 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 MTMR6Q9Y217 621 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 SIP14410 1827 aa21.52■■□□□ 1.04
DDX55-211ENST00000544429 CAND2O75155 1236 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 OATP04181 439 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 OR52Z1P0C646 297 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 CSF2RAP15509 400 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 TXKP42681 527 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 C16orf59Q7L2K0 433 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 CCDC155Q8N6L0 562 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 FAM167AQ96KS9 214 aa21.51■■□□□ 1.03
DDX55-211ENST00000544429 LAMA2P24043 3122 aaKnown RBP21.51■■□□□ 1.03
DDX55-211ENST00000544429 SELPP16109 830 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 CCL23P55773 120 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 PRKCEQ02156 737 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 PTGDRQ13258 359 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 ZNF484Q5JVG2 852 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 TAF2Q6P1X5 1199 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 RUFY4Q6ZNE9 571 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 TRAPPC12Q8WVT3 735 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 CEP89Q96ST8 783 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 HSD17B14Q9BPX1 270 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 UBE2OQ9C0C9 1292 aaKnown RBP21.5■■□□□ 1.03
DDX55-211ENST00000544429 WRAP73Q9P2S5 460 aaPredicted RBP21.5■■□□□ 1.03
DDX55-211ENST00000544429 PCDHA2Q9Y5H9 948 aa21.5■■□□□ 1.03
DDX55-211ENST00000544429 MYH15Q9Y2K3 1946 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 VPS37CA5D8V6 355 aaPredicted RBP21.49■■□□□ 1.03
DDX55-211ENST00000544429 LAD1O00515 517 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 STX6O43752 255 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 MARCH6O60337 910 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 P4HBP07237 508 aaKnown RBP21.49■■□□□ 1.03
DDX55-211ENST00000544429 QARSP47897 775 aaKnown RBP21.49■■□□□ 1.03
DDX55-211ENST00000544429 FXR2P51116 673 aaKnown RBP eCLIP21.49■■□□□ 1.03
DDX55-211ENST00000544429 PSMC5P62195 406 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 RESTQ13127 1097 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 PPIGQ13427 754 aaKnown RBP eCLIP21.49■■□□□ 1.03
DDX55-211ENST00000544429 TARBP2Q15633 366 aaKnown RBP21.49■■□□□ 1.03
DDX55-211ENST00000544429 BANK1Q8NDB2 785 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 SCLYQ96I15 445 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 NIFKQ9BYG3 293 aaKnown RBP21.49■■□□□ 1.03
DDX55-211ENST00000544429 IL23AQ9NPF7 189 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 ARID2Q68CP9 1835 aa21.49■■□□□ 1.03
DDX55-211ENST00000544429 RFC2P35250 354 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 PRPHP41219 470 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 ATP2C1P98194 919 aaPredicted RBP21.48■■□□□ 1.03
DDX55-211ENST00000544429 MBTPS1Q14703 1052 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 XKR3Q5GH77 459 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 FAM26DQ5JW98 314 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 ZNF618Q5T7W0 954 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 NCAPH2Q6IBW4 605 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 MTHFD1LQ6UB35 978 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 LRRC8DQ7L1W4 858 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 C4orf19Q8IY42 314 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 CKAP2LQ8IYA6 745 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 RETREG2Q8NC44 543 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 ZBTB10Q96DT7 871 aa21.48■■□□□ 1.03
DDX55-211ENST00000544429 SMIM35A0A1B0GVV1 85 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 POTEMA6NI47 508 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 SLITRK3O94933 977 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 PARNO95453 639 aaKnown RBP21.47■■□□□ 1.03
DDX55-211ENST00000544429 C22orf31O95567 290 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 PDIA4P13667 645 aaKnown RBP21.47■■□□□ 1.03
DDX55-211ENST00000544429 KLRC1P26715 233 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 IGBP1P78318 339 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 ANO5Q75V66 913 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 TDHQ8IZJ6 230 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 LINC01465Q8N7H1 131 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 IGSF22Q8N9C0 903 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 NEK9Q8TD19 979 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 EIF2AK1Q9BQI3 630 aaKnown RBP21.47■■□□□ 1.03
DDX55-211ENST00000544429 LXNQ9BS40 222 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 NRBP2Q9NSY0 501 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 RGL1Q9NZL6 768 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 CEP131Q9UPN4 1083 aa21.47■■□□□ 1.03
DDX55-211ENST00000544429 LYPLA2O95372 231 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 CXCL10P02778 98 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 RPLP2P05387 115 aaKnown RBP21.46■■□□□ 1.03
DDX55-211ENST00000544429 PFKMP08237 780 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 THPOP40225 353 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 MGAT3Q09327 533 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 SHHQ15465 462 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 IL17AQ16552 155 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 TMEM240Q5SV17 173 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 C9orf50Q5SZB4 431 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 RASIP1Q5U651 963 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 DYDC2Q96IM9 177 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.46■■□□□ 1.036e-9■■■■□ 25.4
DDX55-211ENST00000544429 LOXHD1Q8IVV2 1947 aa21.46■■□□□ 1.03
DDX55-211ENST00000544429 DKC1O60832 514 aaKnown RBP eCLIP21.45■■□□□ 1.02
DDX55-211ENST00000544429 NBNO60934 754 aa21.45■■□□□ 1.02
DDX55-211ENST00000544429 SPATA31C1P0DKV0 1188 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms