RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 CD52P31358 61 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 FAM160B1Q5W0V3 765 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 ABHD15Q6UXT9 468 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 NME8Q8N427 588 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 CELF4Q9BZC1 486 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 UBE2ZQ9H832 354 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 IGLV3-22A0A075B6J6 115 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 IPO5O00410 1097 aaKnown RBP13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 DHX15O43143 795 aaKnown RBP13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 HBP1O60381 514 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 REC8O95072 547 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 RB1P06400 928 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 GNA11P29992 359 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 BMPR1AP36894 532 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 AKAP17AQ02040 695 aaKnown RBP13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 TMEM62Q0P6H9 643 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 PKN1Q16512 942 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 MIS18BP1Q6P0N0 1132 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 MTHFD1LQ6UB35 978 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 RTN4RL1Q86UN2 441 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 FTHL17Q9BXU8 183 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 AGXT2Q9BYV1 514 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 TBC1D22BQ9NU19 505 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 RWDD3Q9Y3V2 267 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 TRPV2Q9Y5S1 764 aa13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
CTNNA1-237ENST00000523275 BRWD1Q9NSI6 2320 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 ADAMTS3O15072 1205 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 KCNA5P22460 613 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 KLRC1P26715 233 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 CTNNB1P35222 781 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 KRT76Q01546 638 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 BTG3Q14201 252 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 LEXMQ3ZCV2 418 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 SWSAP1Q6NVH7 229 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 PDXDC2PQ6P474 469 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 BICD2Q8TD16 824 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 PHKBQ93100 1093 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 ZNF689Q96CS4 500 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 UIMC1Q96RL1 719 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 ZNF577Q9BSK1 485 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 ZNF302Q9NR11 478 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 PADI3Q9ULW8 664 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 SIP14410 1827 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 IGSF9BQ9UPX0 1349 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 KDM3AQ9Y4C1 1321 aa13.36□□□□□ -0.27
CTNNA1-237ENST00000523275 NID2Q14112 1375 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 COL4A6Q14031 1691 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 C5orf67F2Z3F1 127 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 DGKIO75912 1065 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 SETQ01105 290 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 PAK2Q13177 524 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 NTRK3Q16288 839 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 FAM43BQ6ZT52 329 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 CCDC60Q8IWA6 550 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 KIAA0319LQ8IZA0 1049 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 LINC01599Q8WXQ3 324 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 CLP1Q92989 425 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 C11orf84Q9BUA3 381 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 REV3LO60673 3130 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 ADGRA3Q8IWK6 1321 aa13.35□□□□□ -0.27
CTNNA1-237ENST00000523275 COL1A2P08123 1366 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 LINC00271P0C7V0 271 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 STAG3L1P0CL83 205 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 IFNAR1P17181 557 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 ATP4AP20648 1035 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 COL9A1P20849 921 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 CIITAP33076 1130 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 EVCP57679 992 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 PRR16Q569H4 304 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 TCEAL5Q5H9L2 206 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 ZNF746Q6NUN9 644 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 NPAS4Q8IUM7 802 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 CRIPAKQ8N1N5 446 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 SLC26A6Q9BXS9 759 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 LMAN2LQ9H0V9 348 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 NSUN3Q9H649 340 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 TCEAL9Q9UHQ7 104 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 PCDHA10Q9Y5I2 948 aa13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 MAFBQ9Y5Q3 323 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-237ENST00000523275 MUC3AQ02505 3323 aa13.33□□□□□ -0.28
CTNNA1-237ENST00000523275 ZBTB42B2RXF5 422 aa13.33□□□□□ -0.28
CTNNA1-237ENST00000523275 GRM6O15303 877 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms