RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 PACSIN2Q9UNF0 486 aaPredicted RBP18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 RABGAP1Q9Y3P9 1069 aa18.59■□□□□ 0.57
HMGXB3-201ENST00000502717 TULP2O00295 520 aa18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 BFSP1Q12934 665 aa18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 GNPTABQ3T906 1256 aa18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 FAM212AQ96EL1 285 aa18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 XPO6Q96QU8 1125 aaKnown RBP18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 DONSONQ9NYP3 566 aa18.58■□□□□ 0.57
HMGXB3-201ENST00000502717 MYCBPAPQ8TBZ2 947 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 MS4A14Q96JA4 679 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 RPS6KA5O75582 802 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 PRLRP16471 622 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 CA4P22748 312 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 MFAP3P55082 362 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 TBX2Q13207 712 aaPredicted RBP18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 PABPC4Q13310 644 aaKnown RBP eCLIP18.58■□□□□ 0.563e-9■■□□□ 11.7
HMGXB3-201ENST00000502717 TMEM60Q9H2L4 133 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 VCPKMTQ9H867 229 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 SLC5A4Q9NY91 659 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 UTYO14607 1347 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 FRMPD1Q5SYB0 1578 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 ESRRAP11474 423 aaPredicted RBP18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 NR1H3Q13133 447 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 MXD3Q9BW11 206 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 PKD2L1Q9P0L9 805 aa18.58■□□□□ 0.56
HMGXB3-201ENST00000502717 AGTP01019 485 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 ZNF18P17022 549 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 ATF7P17544 494 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CCND1P24385 295 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 AARSP49588 968 aaKnown RBP eCLIP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 FOXO4P98177 505 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 KCNV2Q8TDN2 545 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 PDS5AQ29RF7 1337 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CCT8L1PA6NM43 557 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 PHF20L1A8MW92 1017 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 H0Y3Z8 333 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 GAS7O60861 476 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CHRNA3P32297 505 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 TRIM11Q96F44 468 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 LRRC37BQ96QE4 947 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 FAF1Q9UNN5 650 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 USP32Q8NFA0 1604 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 RHOBTB3O94955 611 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 MAPK4P31152 587 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 SERPINB6P35237 376 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 ST13P4Q8IZP2 240 aaPredicted RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 DIAPH2O60879 1101 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 PPFIA2O75334 1257 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 MSH2P43246 934 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 SATB1Q01826 763 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 DHX34Q14147 1143 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 KSR1Q8IVT5 923 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 DCPSQ96C86 337 aaKnown RBP18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CCSER1Q9C0I3 900 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 AMACRQ9UHK6 382 aa18.57■□□□□ 0.56
HMGXB3-201ENST00000502717 CREB3O43889 395 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 PDHA1P08559 390 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 RWDD2BP57060 319 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 ORC2Q13416 577 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 ZC3H18Q86VM9 953 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 DNAJC7Q99615 494 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 PHF20Q9BVI0 1012 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 SPC25Q9HBM1 224 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 NSFP46459 744 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 SEPT12Q8IYM1 358 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 DDX23Q9BUQ8 820 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 SETD1BQ9UPS6 1966 aaKnown RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 ARL2BPQ9Y2Y0 163 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 RFX1P22670 979 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 RAD23BP54727 409 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 TPD52P55327 224 aaPredicted RBP18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 MAP3K14Q99558 947 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 ISCUQ9H1K1 167 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 POLD4Q9HCU8 107 aa18.56■□□□□ 0.56
HMGXB3-201ENST00000502717 STXBP3O00186 592 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 CAV1Q03135 178 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 SLC18A3Q16572 532 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 TXNRD1Q16881 649 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 USH1GQ495M9 461 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 GSG1L2A8MUP6 293 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 LRRN2O75325 713 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 KCNH2Q12809 1159 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 OSBPL1AQ9BXW6 950 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 AGXT2Q9BYV1 514 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 C1orf112Q9NSG2 853 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 DKC1O60832 514 aaKnown RBP eCLIP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 FOSP01100 380 aaPredicted RBP18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 BRAFP15056 766 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 AOC3Q16853 763 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 DCAF15Q66K64 600 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 FOXR1Q6PIV2 292 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 SPATA31D1Q6ZQQ2 1576 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 K7ENM7 598 aa18.55■□□□□ 0.56
HMGXB3-201ENST00000502717 INHBAP08476 426 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms