RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 NLRP5P59047 1200 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 ERVK-21P61565 698 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 FBXO47Q5MNV8 452 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 FAM160B1Q5W0V3 765 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 SWSAP1Q6NVH7 229 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 MIS18BP1Q6P0N0 1132 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 SP7Q8TDD2 431 aaPredicted RBP10.24□□□□□ -0.77
USF1-204ENST00000472217 ATP8B4Q8TF62 1192 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 TNPO1Q92973 898 aaKnown RBP10.24□□□□□ -0.77
USF1-204ENST00000472217 TOP1MTQ969P6 601 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 LENG9Q96B70 501 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 TGS1Q96RS0 853 aaKnown RBP10.24□□□□□ -0.77
USF1-204ENST00000472217 ZNF302Q9NR11 478 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 TBC1D22BQ9NU19 505 aa10.24□□□□□ -0.77
USF1-204ENST00000472217 SMIM35A0A1B0GVV1 85 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 HBP1O60381 514 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 ATP4AP20648 1035 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 TMEM62Q0P6H9 643 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 NPY5RQ15761 445 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 ZNF746Q6NUN9 644 aaPredicted RBP10.23□□□□□ -0.77
USF1-204ENST00000472217 PDXDC2PQ6P474 469 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
USF1-204ENST00000472217 MTHFD1LQ6UB35 978 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 TSHZ1Q6ZSZ6 1077 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 SMAP1Q8IYB5 467 aaPredicted RBP10.23□□□□□ -0.77
USF1-204ENST00000472217 TBCKQ8TEA7 893 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 ATXN2LQ8WWM7 1075 aaKnown RBP10.23□□□□□ -0.77
USF1-204ENST00000472217 AIFM3Q96NN9 605 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 YME1L1Q96TA2 773 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 C17orf80Q9BSJ5 609 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 AGO3Q9H9G7 860 aaKnown RBP10.23□□□□□ -0.77
USF1-204ENST00000472217 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 PCDHA4Q9UN74 947 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 TRPV2Q9Y5S1 764 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 COL1A2P08123 1366 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 UNC80Q8N2C7 3258 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 CHD7Q9P2D1 2997 aa10.23□□□□□ -0.77
USF1-204ENST00000472217 ZBTB42B2RXF5 422 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 M0QZ92 97 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 M0R2N6 131 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 PSAPP07602 524 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 KLRC1P26715 233 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 CD52P31358 61 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 USP11P51784 963 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 ANAPC15P60006 121 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 KRT76Q01546 638 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 SCRN1Q12765 414 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 SKIV2LQ15477 1246 aaKnown RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 IER5Q5VY09 327 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 BLIDQ8IZY5 108 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 DAGLBQ8NCG7 672 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 FBXO22Q8NEZ5 403 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 LINC01599Q8WXQ3 324 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 ASB2Q96Q27 587 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 CELF4Q9BZC1 486 aaKnown RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 SLKQ9H2G2 1235 aaPredicted RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 TSPYL2Q9H2G4 693 aaPredicted RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 TCEAL9Q9UHQ7 104 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 PCDHA10Q9Y5I2 948 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
USF1-204ENST00000472217 IGSF9BQ9UPX0 1349 aa10.22□□□□□ -0.77
USF1-204ENST00000472217 NLRC5Q86WI3 1866 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 WDR64B1ANS9 1081 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 ENPP3O14638 875 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 MSH4O15457 936 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 CHMP2AO43633 222 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 PFKFB2O60825 505 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 DTNBO60941 627 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 C22orf31O95567 290 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 TFF2Q03403 129 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 EPC2Q52LR7 807 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 ZNF484Q5JVG2 852 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 TRMT1LQ7Z2T5 733 aaKnown RBP10.21□□□□□ -0.77
USF1-204ENST00000472217 KIAA0319LQ8IZA0 1049 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 NME8Q8N427 588 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 BBXQ8WY36 941 aaPredicted RBP10.21□□□□□ -0.77
USF1-204ENST00000472217 SLC5A5Q92911 643 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 GJA10Q969M2 543 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 RIT2Q99578 217 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 C22orf23Q9BZE7 217 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 GABBR1Q9UBS5 961 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 TPCN1Q9ULQ1 816 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 PADI3Q9ULW8 664 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 KCNJ14Q9UNX9 436 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 SAMM50Q9Y512 469 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 SQORQ9Y6N5 450 aa10.21□□□□□ -0.77
USF1-204ENST00000472217 STK36Q9NRP7 1315 aa10.21□□□□□ -0.78
USF1-204ENST00000472217 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.78
USF1-204ENST00000472217 RALGAPA2Q2PPJ7 1873 aa10.21□□□□□ -0.78
USF1-204ENST00000472217 LOXHD1Q8IVV2 1947 aa10.21□□□□□ -0.78
USF1-204ENST00000472217 CYP3A7-CYP3A51PA0A087WV96 503 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 ZNF862O60290 1169 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 GAS7O60861 476 aa10.2□□□□□ -0.78
USF1-204ENST00000472217 PSMD10O75832 226 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms