RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 GCFC2P16383 781 aaKnown RBP21.62■■□□□ 1.05
USP11-205ENST00000467378 KCNJ6P48051 423 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 NHLH1Q02575 133 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 MCTP1Q6DN14 999 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 SPRYD3Q8NCJ5 442 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 SPATA33Q96N06 139 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 ZNF577Q9BSK1 485 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 LMCD1Q9NZU5 365 aa21.62■■□□□ 1.05
USP11-205ENST00000467378 DDX25Q9UHL0 483 aaKnown RBP21.62■■□□□ 1.05
USP11-205ENST00000467378 IPO5O00410 1097 aaKnown RBP21.61■■□□□ 1.05
USP11-205ENST00000467378 SLC37A4O43826 429 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 IQCF3P0C7M6 154 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 HOXD8P13378 290 aaPredicted RBP21.61■■□□□ 1.05
USP11-205ENST00000467378 ALADP13716 330 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 BECN1Q14457 450 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 BRDTQ58F21 947 aaPredicted RBP21.61■■□□□ 1.05
USP11-205ENST00000467378 GPR20Q99678 358 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 ZBED2Q9BTP6 218 aa21.61■■□□□ 1.05
USP11-205ENST00000467378 LCHNA4D1U4 455 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 PURAQ00577 322 aaKnown RBP21.6■■□□□ 1.05
USP11-205ENST00000467378 ETNPPLQ8TBG4 499 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 PPP1R13LQ8WUF5 828 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 SLC5A5Q92911 643 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 SDF4Q9BRK5 362 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 TBC1D22BQ9NU19 505 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 SLC9A2Q9UBY0 812 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 MTUS1Q9ULD2 1270 aa21.6■■□□□ 1.05
USP11-205ENST00000467378 GSTTP1A0A1W2PQM5 241 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 VPS37CA5D8V6 355 aaPredicted RBP21.59■■□□□ 1.05
USP11-205ENST00000467378 PITPNM1O00562 1244 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 KPNA6O60684 536 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 PPFIA4O75335 1185 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 BAIAP3O94812 1187 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 IL9P15248 144 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 KCNA5P22460 613 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 TOB1P50616 345 aaPredicted RBP21.59■■□□□ 1.05
USP11-205ENST00000467378 DGKDQ16760 1214 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 NBPF20Q3BBV1 942 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 LEXMQ3ZCV2 418 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 MTG1Q9BT17 334 aaPredicted RBP21.59■■□□□ 1.05
USP11-205ENST00000467378 JPH1Q9HDC5 661 aaPredicted RBP21.59■■□□□ 1.05
USP11-205ENST00000467378 KCNMB3Q9NPA1 279 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 MTMR6Q9Y217 621 aa21.59■■□□□ 1.05
USP11-205ENST00000467378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.58■■□□□ 1.05
USP11-205ENST00000467378 STX6O43752 255 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 ATP2B1P20020 1258 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 TRAPPC10P48553 1259 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 BFSP2Q13515 415 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 TMCO2Q7Z6W1 182 aaPredicted RBP21.58■■□□□ 1.05
USP11-205ENST00000467378 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.58■■□□□ 1.05
USP11-205ENST00000467378 GJA10Q969M2 543 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 FBXL18Q96ME1 805 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 RIT2Q99578 217 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 NOL7Q9UMY1 257 aaKnown RBP21.58■■□□□ 1.05
USP11-205ENST00000467378 NOD1Q9Y239 953 aa21.58■■□□□ 1.05
USP11-205ENST00000467378 MYH15Q9Y2K3 1946 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 DDX39AO00148 427 aaKnown RBP21.57■■□□□ 1.04
USP11-205ENST00000467378 NOP56O00567 594 aaKnown RBP21.57■■□□□ 1.04
USP11-205ENST00000467378 TBX3O15119 743 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 PSMD10O75832 226 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 ATG7O95352 703 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 SP4Q02446 784 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 PTCRAQ6ISU1 281 aaPredicted RBP21.57■■□□□ 1.04
USP11-205ENST00000467378 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 SEPT1Q8WYJ6 367 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 KAT2BQ92831 832 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 HAS1Q92839 578 aa21.57■■□□□ 1.04
USP11-205ENST00000467378 MYH9P35579 1960 aaKnown RBP21.56■■□□□ 1.04
USP11-205ENST00000467378 CCNE2O96020 404 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 ACTR2P61160 394 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 WDR5P61964 334 aaKnown RBP21.56■■□□□ 1.04
USP11-205ENST00000467378 TTC38Q5R3I4 469 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 FAM20AQ96MK3 541 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 C16orf70Q9BSU1 422 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 SUGCTQ9HAC7 445 aa21.56■■□□□ 1.04
USP11-205ENST00000467378 LGALS2P05162 132 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 TCF7P36402 384 aaPredicted RBP21.55■■□□□ 1.04
USP11-205ENST00000467378 ORC2Q13416 577 aaPredicted RBP21.55■■□□□ 1.04
USP11-205ENST00000467378 NBR1Q14596 966 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 ZNF174Q15697 407 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 LRCH2Q5VUJ6 765 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 B3GNT9Q6UX72 402 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 BRAPQ7Z569 592 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 FERMT3Q86UX7 667 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 TGS1Q96RS0 853 aaKnown RBP21.55■■□□□ 1.04
USP11-205ENST00000467378 TEKT3Q9BXF9 490 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 KCNH6Q9H252 994 aa21.55■■□□□ 1.04
USP11-205ENST00000467378 DCXO43602 365 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 NEMFO60524 1076 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 GAS7O60861 476 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 PDIA4P13667 645 aaKnown RBP21.54■■□□□ 1.04
USP11-205ENST00000467378 MCM7P33993 719 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 CHMP4BP1P59074 171 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 DEFB103AP81534 67 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 KRT76Q01546 638 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 RESTQ13127 1097 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 RILPL1Q5EBL4 403 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 ZNF746Q6NUN9 644 aaPredicted RBP21.54■■□□□ 1.04
USP11-205ENST00000467378 NFRKBQ6P4R8 1299 aa21.54■■□□□ 1.04
USP11-205ENST00000467378 ABHD15Q6UXT9 468 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms