RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 MIS18BP1Q6P0N0 1132 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 FAM117BQ6P1L5 589 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 MYOCDQ8IZQ8 938 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 TBCKQ8TEA7 893 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 ATP8B4Q8TF62 1192 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 ZNF302Q9NR11 478 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 PCDHA2Q9Y5H9 948 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 CDY2AQ9Y6F7 541 aa21.45■■□□□ 1.02
COL5A1-203ENST00000460264 HBP1O60381 514 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
COL5A1-203ENST00000460264 LPIN1Q14693 890 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 GALNT17Q6IS24 598 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 SWSAP1Q6NVH7 229 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 PDXDC2PQ6P474 469 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 SMAP1Q8IYB5 467 aaPredicted RBP21.44■■□□□ 1.02
COL5A1-203ENST00000460264 ARNTL2Q8WYA1 636 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 TCEAL9Q9UHQ7 104 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 PRRC2BQ5JSZ5 2229 aaKnown RBP21.44■■□□□ 1.02
COL5A1-203ENST00000460264 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
COL5A1-203ENST00000460264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.43■■□□□ 1.02
COL5A1-203ENST00000460264 RFXAPO00287 272 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 MSH4O15457 936 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 SEC24BO95487 1268 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 FBXO47Q5MNV8 452 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 PPM1EQ8WY54 764 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 KCNJ14Q9UNX9 436 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 COL1A2P08123 1366 aa21.43■■□□□ 1.02
COL5A1-203ENST00000460264 SMIM35A0A1B0GVV1 85 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 DLL1O00548 723 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 DTNBO60941 627 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 CTDNEP1O95476 244 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 PSAPP07602 524 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 ATP4AP20648 1035 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 HTRA4P83105 476 aaPredicted RBP21.42■■□□□ 1.02
COL5A1-203ENST00000460264 MTHFD1LQ6UB35 978 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 TSHZ1Q6ZSZ6 1077 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 NLRC5Q86WI3 1866 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 SLC5A5Q92911 643 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 RIT2Q99578 217 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 PHF20Q9BVI0 1012 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 INSL6Q9Y581 213 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 PCDHA10Q9Y5I2 948 aa21.42■■□□□ 1.02
COL5A1-203ENST00000460264 MAFBQ9Y5Q3 323 aaPredicted RBP21.42■■□□□ 1.02
COL5A1-203ENST00000460264 IGSF9BQ9UPX0 1349 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 ZBTB42B2RXF5 422 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 TDP2O95551 362 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 POU3F3P20264 500 aaPredicted RBP21.41■■□□□ 1.02
COL5A1-203ENST00000460264 KLRC1P26715 233 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 CCDC85BQ15834 202 aaPredicted RBP21.41■■□□□ 1.02
COL5A1-203ENST00000460264 IER5Q5VY09 327 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 CKAP2LQ8IYA6 745 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 TOP1MTQ969P6 601 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 TRPV2Q9Y5S1 764 aa21.41■■□□□ 1.02
COL5A1-203ENST00000460264 TTC3P53804 2025 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 CYP3A7-CYP3A51PA0A087WV96 503 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 WDR64B1ANS9 1081 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 GAS7O60861 476 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 LARGE1O95461 756 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 CYP3A7P24462 503 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 ERVK-21P61565 698 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 TMEM62Q0P6H9 643 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 NONOQ15233 471 aaKnown RBP eCLIP21.4■■□□□ 1.02
COL5A1-203ENST00000460264 ME3Q16798 604 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 Q4G0T1 1027 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 ZNF484Q5JVG2 852 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 LRCH2Q5VUJ6 765 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 KRT25Q7Z3Z0 450 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 SP7Q8TDD2 431 aaPredicted RBP21.4■■□□□ 1.02
COL5A1-203ENST00000460264 BBXQ8WY36 941 aaPredicted RBP21.4■■□□□ 1.02
COL5A1-203ENST00000460264 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 AGO3Q9H9G7 860 aaKnown RBP21.4■■□□□ 1.02
COL5A1-203ENST00000460264 PRDM6Q9NQX0 595 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 GJB4Q9NTQ9 266 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 SAMM50Q9Y512 469 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 MTCH2Q9Y6C9 303 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 RALGAPA2Q2PPJ7 1873 aa21.4■■□□□ 1.02
COL5A1-203ENST00000460264 M0QZ92 97 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 LPXNO60711 386 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 NEK4P51957 841 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 GRB10Q13322 594 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 MOXD1Q6UVY6 613 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 MICALL1Q8N3F8 863 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 NECAB1Q8N987 351 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 GJA10Q969M2 543 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 MBOAT7Q96N66 472 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 TGS1Q96RS0 853 aaKnown RBP21.39■■□□□ 1.01
COL5A1-203ENST00000460264 TEKT3Q9BXF9 490 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 DISC1Q9NRI5 854 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 ORC3Q9UBD5 711 aaPredicted RBP21.39■■□□□ 1.01
COL5A1-203ENST00000460264 GABBR1Q9UBS5 961 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 MTUS1Q9ULD2 1270 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 SQORQ9Y6N5 450 aa21.39■■□□□ 1.01
COL5A1-203ENST00000460264 KDM3AQ9Y4C1 1321 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 GTPBP6O43824 516 aaPredicted RBP21.38■■□□□ 1.01
COL5A1-203ENST00000460264 PSMD10O75832 226 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 UPP2O95045 317 aa21.38■■□□□ 1.01
COL5A1-203ENST00000460264 C22orf31O95567 290 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms