RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DDX49Q9Y6V7 483 aaKnown RBP8.65□□□□□ -1.03
BRCC3-208ENST00000453705 FAM221AA4D161 298 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ZBTB39O15060 712 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 APBA3O96018 575 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 GPTP24298 496 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 IGHMBP2P38935 993 aaKnown RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 PPA1Q15181 289 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 SMAD1Q15797 465 aaKnown RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 PPP2R5EQ16537 467 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 MUM1Q2TAK8 710 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 FASTKD5Q7L8L6 764 aaKnown RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CEP57L1Q8IYX8 460 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ZGPATQ8N5A5 531 aaKnown RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 SMARCC2Q8TAQ2 1214 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 RABGGTAQ92696 567 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 NINJ1Q92982 152 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 FAM129BQ96TA1 746 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ZNF304Q9HCX3 659 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CNNM1Q9NRU3 951 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 LMBRD1Q9NUN5 540 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 IRAK4Q9NWZ3 460 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 UBAP1Q9NZ09 502 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 NAV1Q8NEY1 1877 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 A6NNZ2 444 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CCP110O43303 1012 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 EOMESO95936 686 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CYP21A2P08686 494 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 PDCP20941 246 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 TNNT3P45378 269 aaPredicted RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 KCNQ4P56696 695 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CYP4A11Q02928 519 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ACAP1Q15027 740 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 WSCD2Q2TBF2 565 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 CCDC102BQ68D86 513 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 FAM186BQ8IYM0 893 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 DRAXINQ8NBI3 349 aaPredicted RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 ZNF274Q96GC6 653 aaPredicted RBP8.64□□□□□ -1.03
BRCC3-208ENST00000453705 NEK1Q96PY6 1258 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 TNKS2Q9H2K2 1166 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 PDLIM7Q9NR12 457 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 PLAAQ9Y263 795 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 SALL1Q9NSC2 1324 aa8.64□□□□□ -1.03
BRCC3-208ENST00000453705 RRN3P2A6NIE6 340 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 LRRC10BA6NIK2 292 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 MINDY4BA8MYZ0 360 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 PFKFB2O60825 505 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 MBD3O95983 291 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 NEFHP12036 1026 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 IRS1P35568 1242 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 ZNF445P59923 1031 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 WDR44Q5JSH3 913 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 CNNM4Q6P4Q7 775 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
BRCC3-208ENST00000453705 LEO1Q8WVC0 666 aaPredicted RBP8.63□□□□□ -1.03
BRCC3-208ENST00000453705 ANKRD2Q9GZV1 360 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 PCDHB3Q9Y5E6 796 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 KIF13BQ9NQT8 1826 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 COL11A2P13942 1736 aaPredicted RBP8.63□□□□□ -1.03
BRCC3-208ENST00000453705 M0R2C6 588 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 PF4V1P10720 104 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 MAN2A2P49641 1150 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 TMPRSS15P98073 1019 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 PABPC4Q13310 644 aaKnown RBP eCLIP8.63□□□□□ -1.03
BRCC3-208ENST00000453705 ARHGAP29Q52LW3 1261 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 ITPRIPL1Q6GPH6 555 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 RTKN2Q8IZC4 609 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 SYNE4Q8N205 404 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 GTF3C6Q969F1 213 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 OSBP2Q969R2 916 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 GMCL1Q96IK5 515 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 STARD7Q9NQZ5 370 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 LRRC4BQ9NT99 713 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 PCDHGA4Q9Y5G9 962 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
BRCC3-208ENST00000453705 COL1A1P02452 1464 aaPredicted RBP8.62□□□□□ -1.03
BRCC3-208ENST00000453705 ZPR1O75312 459 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 MT-ND3P03897 115 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 HSPA6P17066 643 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 VCAM1P19320 739 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 TMOD1P28289 359 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 ZAP70P43403 619 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 ALDH5A1P51649 535 aaPredicted RBP8.62□□□□□ -1.03
BRCC3-208ENST00000453705 IRX5P78411 483 aaPredicted RBP8.62□□□□□ -1.03
BRCC3-208ENST00000453705 CCDC173Q0VFZ6 552 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 AP3B2Q13367 1082 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 SLC14A2Q15849 920 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 PTPN21Q16825 1174 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 LRCH2Q5VUJ6 765 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 KAZNQ674X7 775 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 TRIM74Q86UV6 250 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 TRIM73Q86UV7 250 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 CNTD1Q8N815 330 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 EDC3Q96F86 508 aaKnown RBP8.62□□□□□ -1.03
BRCC3-208ENST00000453705 UPF3BQ9BZI7 483 aaKnown RBP8.62□□□□□ -1.03
BRCC3-208ENST00000453705 ACAD9Q9H845 621 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 BRD9Q9H8M2 597 aa8.62□□□□□ -1.03
BRCC3-208ENST00000453705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms