RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 RNF180Q86T96 592 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 SCUBE1Q8IWY4 988 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 SMARCC2Q8TAQ2 1214 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 CPA5Q8WXQ8 436 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 IPO9Q96P70 1041 aaKnown RBP5.78□□□□□ -1.48
LINC00393-202ENST00000452852 TARS2Q9BW92 718 aaKnown RBP5.78□□□□□ -1.48
LINC00393-202ENST00000452852 JAM3Q9BX67 310 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 ZMYM3Q14202 1370 aa5.78□□□□□ -1.48
LINC00393-202ENST00000452852 CCDC141Q6ZP82 1450 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 CEP170BQ9Y4F5 1589 aaPredicted RBP5.77□□□□□ -1.49
LINC00393-202ENST00000452852 PTPRTO14522 1441 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 HGSO14964 777 aaPredicted RBP5.77□□□□□ -1.49
LINC00393-202ENST00000452852 DGKIO75912 1065 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 EXOSC10Q01780 885 aaKnown RBP5.77□□□□□ -1.49
LINC00393-202ENST00000452852 FNDC3BQ53EP0 1204 aaKnown RBP5.77□□□□□ -1.49
LINC00393-202ENST00000452852 STEAP3Q658P3 488 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 GGT6Q6P531 493 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 LBX2Q6XYB7 198 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 STRA8Q7Z7C7 330 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 FAM26EQ8N5C1 309 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.77□□□□□ -1.49
LINC00393-202ENST00000452852 NOX5Q96PH1 765 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 EPB41L1Q9H4G0 881 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 EID1Q9Y6B2 187 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 PMF1-BGLAPU3KQ54 211 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 CAMSAP2Q08AD1 1489 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 NCOA2Q15596 1464 aa5.77□□□□□ -1.49
LINC00393-202ENST00000452852 ADAMTS20P59510 1910 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 RTEL1-TNFRSF6BF6WH68 1400 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 NCOA1Q15788 1441 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 FAM135AQ9P2D6 1515 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 FFAR3O14843 346 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 TADA3O75528 432 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 C8BP07358 591 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 BMP7P18075 431 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 GPR85P60893 370 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 HTRA3P83110 453 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 CHRNA2Q15822 529 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 EMC4Q5J8M3 183 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 ETV3LQ6ZN32 361 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 MIB1Q86YT6 1006 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 IFNL3Q8IZI9 196 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 FNIP1Q8TF40 1166 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 DDX11Q96FC9 970 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 ZFYVE21Q9BQ24 234 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 SYT3Q9BQG1 590 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 MCM8Q9UJA3 840 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 ZNF652Q9Y2D9 606 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 TRAF6Q9Y4K3 522 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 ARHGEF5Q12774 1597 aa5.76□□□□□ -1.49
LINC00393-202ENST00000452852 ZC3H13Q5T200 1668 aaKnown RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 ZNF644Q9H582 1327 aaPredicted RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 WASHC2CQ9Y4E1 1318 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 KDM5DQ9BY66 1539 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 TRIM13O60858 407 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 C6orf222P0C671 652 aaPredicted RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 GRK2P25098 689 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 GRK3P35626 688 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 SUMO1P63165 101 aaKnown RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 KIZQ2M2Z5 673 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 CD300LDQ6UXZ3 194 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 LRRTM3Q86VH5 581 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 LINC01356Q8N9X3 169 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 LEO1Q8WVC0 666 aaPredicted RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 TSR2Q969E8 191 aaKnown RBP5.75□□□□□ -1.49
LINC00393-202ENST00000452852 KCNJ15Q99712 375 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 PCDHB4Q9Y5E5 795 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 MBD5Q9P267 1494 aa5.75□□□□□ -1.49
LINC00393-202ENST00000452852 CCDC194A0A1B0GVG4 234 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 TCRBV5S2A0A599 114 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 KIF3BO15066 747 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 KATNA1O75449 491 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 ALDH1L1O75891 902 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 INHBBP09529 407 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 TSPY4P0CV99 314 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 TSPY10P0CW01 314 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 CYP2C8P10632 490 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 STAT5AP42229 794 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 GUCY2FP51841 1108 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 CAP1Q01518 475 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 VWA3BQ502W6 1294 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 WDR75Q8IWA0 830 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 FAM126BQ8IXS8 530 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 ADGRG2Q8IZP9 1017 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 AFAP1L2Q8N4X5 818 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 MARCH10Q8NA82 808 aaPredicted RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 TP53I13Q8NBR0 393 aaPredicted RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 ARRDC4Q8NCT1 418 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 SLC7A14Q8TBB6 771 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 PIP4K2CQ8TBX8 421 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 PTPRN2Q92932 1015 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 MRPL4Q9BYD3 311 aaKnown RBP5.74□□□□□ -1.49
LINC00393-202ENST00000452852 SLC6A20Q9NP91 592 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 MYOTQ9UBF9 498 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 NDOR1Q9UHB4 597 aa5.74□□□□□ -1.49
LINC00393-202ENST00000452852 TCEAL9Q9UHQ7 104 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms