RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMEM62Q0P6H9 643 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 PKN1Q16512 942 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 ABHD15Q6UXT9 468 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 PHKBQ93100 1093 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 IGLV3-22A0A075B6J6 115 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 IGKV6D-21A0A0A0MT36 114 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 IPO5O00410 1097 aaKnown RBP23.91■■□□□ 1.42
VSX1-206ENST00000444511 MIS18BP1Q6P0N0 1132 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 MTHFD1LQ6UB35 978 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 CRYGNQ8WXF5 182 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 AGXT2Q9BYV1 514 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 UBE2ZQ9H832 354 aaPredicted RBP23.91■■□□□ 1.42
VSX1-206ENST00000444511 AGO3Q9H9G7 860 aaKnown RBP23.91■■□□□ 1.42
VSX1-206ENST00000444511 SQORQ9Y6N5 450 aa23.91■■□□□ 1.42
VSX1-206ENST00000444511 SMIM35A0A1B0GVV1 85 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 HBP1O60381 514 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 SETQ01105 290 aaPredicted RBP23.9■■□□□ 1.42
VSX1-206ENST00000444511 TIGD5Q53EQ6 642 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 PDXDC2PQ6P474 469 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 CCDC60Q8IWA6 550 aaPredicted RBP23.9■■□□□ 1.42
VSX1-206ENST00000444511 BICD2Q8TD16 824 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 ATP8B4Q8TF62 1192 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 UIMC1Q96RL1 719 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 ZNF577Q9BSK1 485 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 SLC26A6Q9BXS9 759 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 FTHL17Q9BXU8 183 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 RNF26Q9BY78 433 aaPredicted RBP23.9■■□□□ 1.42
VSX1-206ENST00000444511 ZNF302Q9NR11 478 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 TCEAL9Q9UHQ7 104 aa23.9■■□□□ 1.42
VSX1-206ENST00000444511 ADGRA3Q8IWK6 1321 aa23.89■■□□□ 1.42
VSX1-206ENST00000444511 ADAMTS3O15072 1205 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 DHX15O43143 795 aaKnown RBP23.89■■□□□ 1.41
VSX1-206ENST00000444511 PPFIA3O75145 1194 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 CTNNB1P35222 781 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 PAK2Q13177 524 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 SWSAP1Q6NVH7 229 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 NME8Q8N427 588 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 CCDC148Q8NFR7 591 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 CELF4Q9BZC1 486 aaKnown RBP23.89■■□□□ 1.41
VSX1-206ENST00000444511 TBC1D22BQ9NU19 505 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 RWDD3Q9Y3V2 267 aa23.89■■□□□ 1.41
VSX1-206ENST00000444511 TCF20Q9UGU0 1960 aaKnown RBP23.89■■□□□ 1.41
VSX1-206ENST00000444511 IFNAR1P17181 557 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 KLRC1P26715 233 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 CCT2P78371 535 aaKnown RBP23.88■■□□□ 1.41
VSX1-206ENST00000444511 KRT76Q01546 638 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 BTG3Q14201 252 aaPredicted RBP23.88■■□□□ 1.41
VSX1-206ENST00000444511 NTRK3Q16288 839 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 CKAP2LQ8IYA6 745 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 BANK1Q8NDB2 785 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 PADI3Q9ULW8 664 aa23.88■■□□□ 1.41
VSX1-206ENST00000444511 IGSF9BQ9UPX0 1349 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.87■■□□□ 1.41
VSX1-206ENST00000444511 KCNA5P22460 613 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 PDIA3P30101 505 aaKnown RBP23.87■■□□□ 1.41
VSX1-206ENST00000444511 PRR16Q569H4 304 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 ZNF484Q5JVG2 852 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 ZNF746Q6NUN9 644 aaPredicted RBP23.87■■□□□ 1.41
VSX1-206ENST00000444511 RASGRP4Q8TDF6 673 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 LINC01599Q8WXQ3 324 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 RC3H2Q9HBD1 1191 aaKnown RBP23.87■■□□□ 1.41
VSX1-206ENST00000444511 NCOA5Q9HCD5 579 aaKnown RBP23.87■■□□□ 1.41
VSX1-206ENST00000444511 VPS54Q9P1Q0 977 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 COL1A2P08123 1366 aa23.87■■□□□ 1.41
VSX1-206ENST00000444511 KDM3AQ9Y4C1 1321 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 DGKIO75912 1065 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 RB1P06400 928 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 BMPR1AP36894 532 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 RUFY3Q7L099 469 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 SMAP1Q8IYB5 467 aaPredicted RBP23.86■■□□□ 1.41
VSX1-206ENST00000444511 ZNF689Q96CS4 500 aaPredicted RBP23.86■■□□□ 1.41
VSX1-206ENST00000444511 C11orf84Q9BUA3 381 aaPredicted RBP23.86■■□□□ 1.41
VSX1-206ENST00000444511 GINS2Q9Y248 185 aa23.86■■□□□ 1.41
VSX1-206ENST00000444511 C5orf67F2Z3F1 127 aa23.85■■□□□ 1.41
VSX1-206ENST00000444511 EVCP57679 992 aa23.85■■□□□ 1.41
VSX1-206ENST00000444511 RTN4RL1Q86UN2 441 aaPredicted RBP23.85■■□□□ 1.41
VSX1-206ENST00000444511 NPAS4Q8IUM7 802 aa23.85■■□□□ 1.41
VSX1-206ENST00000444511 NSUN3Q9H649 340 aaKnown RBP23.85■■□□□ 1.41
VSX1-206ENST00000444511 EPB41L2O43491 1005 aaKnown RBP23.84■■□□□ 1.41
VSX1-206ENST00000444511 PSAPP07602 524 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 STAG3L1P0CL83 205 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 CIITAP33076 1130 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 NFX1Q12986 1120 aaKnown RBP23.84■■□□□ 1.41
VSX1-206ENST00000444511 TMEM266Q2M3C6 531 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 LEXMQ3ZCV2 418 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 TCEAL5Q5H9L2 206 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 TRIM22Q8IYM9 498 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 KIAA0319LQ8IZA0 1049 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 BBXQ8WY36 941 aaPredicted RBP23.84■■□□□ 1.41
VSX1-206ENST00000444511 CLP1Q92989 425 aaKnown RBP23.84■■□□□ 1.41
VSX1-206ENST00000444511 ZSWIM6Q9HCJ5 1215 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 SAMM50Q9Y512 469 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 PCDHA10Q9Y5I2 948 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 CYP46A1Q9Y6A2 500 aa23.84■■□□□ 1.41
VSX1-206ENST00000444511 LINC00271P0C7V0 271 aa23.83■■□□□ 1.41
VSX1-206ENST00000444511 ATP4AP20648 1035 aa23.83■■□□□ 1.41
VSX1-206ENST00000444511 NLRP5P59047 1200 aa23.83■■□□□ 1.41
VSX1-206ENST00000444511 TOB2Q14106 344 aaPredicted RBP23.83■■□□□ 1.41
VSX1-206ENST00000444511 TRMT1LQ7Z2T5 733 aaKnown RBP23.83■■□□□ 1.41
VSX1-206ENST00000444511 LMAN2LQ9H0V9 348 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms