RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 ZBTB10Q96DT7 871 aa23.62■■□□□ 1.37
CPNE1-219ENST00000440240 CELF4Q9BZC1 486 aaKnown RBP23.62■■□□□ 1.37
CPNE1-219ENST00000440240 LMAN2LQ9H0V9 348 aa23.62■■□□□ 1.37
CPNE1-219ENST00000440240 EPHX3Q9H6B9 360 aa23.62■■□□□ 1.37
CPNE1-219ENST00000440240 TCEAL5Q5H9L2 206 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 PTCRAQ6ISU1 281 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-219ENST00000440240 MTHFD1LQ6UB35 978 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 ABHD15Q6UXT9 468 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 NEK9Q8TD19 979 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
CPNE1-219ENST00000440240 TRAPPC12Q8WVT3 735 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 PABPC5Q96DU9 382 aaKnown RBP23.61■■□□□ 1.37
CPNE1-219ENST00000440240 RC3H2Q9HBD1 1191 aaKnown RBP23.61■■□□□ 1.37
CPNE1-219ENST00000440240 PADI3Q9ULW8 664 aa23.61■■□□□ 1.37
CPNE1-219ENST00000440240 BACH1O14867 736 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 HBP1O60381 514 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 CYP3A4P08684 503 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 SCG2P13521 617 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 KRT76Q01546 638 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 TMEM62Q0P6H9 643 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 JAKMIP3Q5VZ66 844 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 RTN4RL1Q86UN2 441 aaPredicted RBP23.6■■□□□ 1.37
CPNE1-219ENST00000440240 PLA2G4DQ86XP0 818 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 FAM178BQ8IXR5 827 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 KCNB2Q92953 911 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 PLVAPQ9BX97 442 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 C6orf50Q9HD87 102 aa23.6■■□□□ 1.37
CPNE1-219ENST00000440240 IGSF9BQ9UPX0 1349 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 KDM3AQ9Y4C1 1321 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 TTC3P53804 2025 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 ESYT2A0FGR8 921 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 GRXCR2A6NFK2 248 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 FAM86B1E9PN63 330 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 IPO5O00410 1097 aaKnown RBP23.59■■□□□ 1.37
CPNE1-219ENST00000440240 CCNE2O96020 404 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 FAM86B2P0C5J1 330 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 LINC00271P0C7V0 271 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 STAG3L1P0CL83 205 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 KLRC1P26715 233 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 PAK2Q13177 524 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 COL19A1Q14993 1142 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 MIS18BP1Q6P0N0 1132 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 Q6ZUG5 572 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 NPAS4Q8IUM7 802 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 ZMYND12Q9H0C1 365 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 FAM50BQ9Y247 325 aa23.59■■□□□ 1.37
CPNE1-219ENST00000440240 MYO7AQ13402 2215 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 DDX39AO00148 427 aaKnown RBP23.58■■□□□ 1.37
CPNE1-219ENST00000440240 DHX15O43143 795 aaKnown RBP23.58■■□□□ 1.37
CPNE1-219ENST00000440240 GNA11P29992 359 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 APOBRQ0VD83 1088 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 EP400NLQ6ZTU2 488 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 GJD3Q8N144 294 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 CRIPAKQ8N1N5 446 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 ATP8B4Q8TF62 1192 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 CRYGNQ8WXF5 182 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 BRF1Q92994 677 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 ZNF302Q9NR11 478 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 TBC1D22BQ9NU19 505 aa23.58■■□□□ 1.37
CPNE1-219ENST00000440240 COL1A2P08123 1366 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 IGLV3-22A0A075B6J6 115 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 H3BQ06 376 aaPredicted RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 GRM6O15303 877 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 PRPF3O43395 683 aaKnown RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 AKAP17AQ02040 695 aaKnown RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 NAALADL2Q58DX5 795 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 ZNF484Q5JVG2 852 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 SWSAP1Q6NVH7 229 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 PDXDC2PQ6P474 469 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 BLOC1S2Q6QNY1 142 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 CMTR2Q8IYT2 770 aaKnown RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 REXO1Q8N1G1 1221 aaKnown RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 FBXL16Q8N461 479 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 LINC01599Q8WXQ3 324 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 JAKMIP1Q96N16 626 aaKnown RBP23.57■■□□□ 1.36
CPNE1-219ENST00000440240 CD320Q9NPF0 282 aa23.57■■□□□ 1.36
CPNE1-219ENST00000440240 PI4K2BG5E9Z4 385 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 CPA1P15085 419 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 IL9P15248 144 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 HSPA4P34932 840 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 SETQ01105 290 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-219ENST00000440240 TMEM31Q5JXX7 168 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 ODR4Q5SWX8 454 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 CCDC60Q8IWA6 550 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-219ENST00000440240 P2RX5Q93086 422 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 ZNF577Q9BSK1 485 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 LRFN3Q9BTN0 628 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 RNF216Q9NWF9 866 aaPredicted RBP23.56■■□□□ 1.36
CPNE1-219ENST00000440240 RAPGEFL1Q9UHV5 662 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 SNX14Q9Y5W7 946 aa23.56■■□□□ 1.36
CPNE1-219ENST00000440240 NFX1Q12986 1120 aaKnown RBP23.55■■□□□ 1.36
CPNE1-219ENST00000440240 KIAA0319LQ8IZA0 1049 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 BICD2Q8TD16 824 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 CLDND1Q9NY35 253 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 TCEAL9Q9UHQ7 104 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 LRFN2Q9ULH4 789 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 RALGAPA2Q2PPJ7 1873 aa23.55■■□□□ 1.36
CPNE1-219ENST00000440240 GPR37L1O60883 481 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 MMP1P03956 469 aa23.54■■□□□ 1.36
CPNE1-219ENST00000440240 PSMA5P28066 241 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms