RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 BRAPQ7Z569 592 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 RPUSD2Q8IZ73 545 aaKnown RBP13.29□□□□□ -0.28
HSPG2-206ENST00000439717 TDHQ8IZJ6 230 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 TMEM60Q9H2L4 133 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-206ENST00000439717 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 CEP131Q9UPN4 1083 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 CEP290O15078 2479 aa13.29□□□□□ -0.28
HSPG2-206ENST00000439717 VPS37CA5D8V6 355 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-206ENST00000439717 LAD1O00515 517 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 ZNF862O60290 1169 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 OATP04181 439 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
HSPG2-206ENST00000439717 HSP90AA1P07900 732 aaKnown RBP13.28□□□□□ -0.28
HSPG2-206ENST00000439717 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 SYT1P21579 422 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 THPOP40225 353 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 TXKP42681 527 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
HSPG2-206ENST00000439717 PSMC5P62195 406 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 IGBP1P78318 339 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 PRKCEQ02156 737 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 UGCGQ16739 394 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 NCAPH2Q6IBW4 605 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 PSRC1Q6PGN9 363 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-206ENST00000439717 RSPH3Q86UC2 560 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 WNT8BQ93098 351 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
HSPG2-206ENST00000439717 SMIM35A0A1B0GVV1 85 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 ZBTB42B2RXF5 422 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 EPHB4P54760 987 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 XKR3Q5GH77 459 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 MTHFD1LQ6UB35 978 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 C4orf32Q8N8J7 132 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 NEK9Q8TD19 979 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 SCLYQ96I15 445 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 NIFKQ9BYG3 293 aaKnown RBP13.27□□□□□ -0.29
HSPG2-206ENST00000439717 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.27□□□□□ -0.29
HSPG2-206ENST00000439717 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 PCDHB6Q9Y5E3 794 aa13.27□□□□□ -0.29
HSPG2-206ENST00000439717 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 MAGEB2O15479 319 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 KLRC1P26715 233 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
HSPG2-206ENST00000439717 PTGDRQ13258 359 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 NBR1Q14596 966 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 SHHQ15465 462 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
HSPG2-206ENST00000439717 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 TMEM240Q5SV17 173 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 RUFY4Q6ZNE9 571 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 C16orf59Q7L2K0 433 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 C4orf19Q8IY42 314 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 NME8Q8N427 588 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 BANK1Q8NDB2 785 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 TRAPPC12Q8WVT3 735 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 HSD17B14Q9BPX1 270 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 EIF2AK1Q9BQI3 630 aaKnown RBP13.26□□□□□ -0.29
HSPG2-206ENST00000439717 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.26□□□□□ -0.292e-10■■■■□ 20.7
HSPG2-206ENST00000439717 ZSWIM4Q9H7M6 989 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 PPME1Q9Y570 386 aa13.26□□□□□ -0.29
HSPG2-206ENST00000439717 MYH9P35579 1960 aaKnown RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 STX6O43752 255 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 SLITRK3O94933 977 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 STBD1O95210 358 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 LYPLA2O95372 231 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 FGBP02675 491 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 CXCL10P02778 98 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 ACRP10323 421 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 PRPHP41219 470 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 TECP42680 631 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 TARBP2Q15633 366 aaKnown RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 LRIT3Q3SXY7 679 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 ZNF365Q70YC5 407 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 DNAJB3Q8WWF6 145 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 HERVK_113Q902F9 699 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 VWCEQ96DN2 955 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 DYDC2Q96IM9 177 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 LXNQ9BS40 222 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 RAB34Q9BZG1 259 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 MTIF3Q9H2K0 278 aaKnown RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 ZSCAN16Q9H4T2 348 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 RGL1Q9NZL6 768 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 MTMR6Q9Y217 621 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 STK24Q9Y6E0 443 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 KAT6AQ92794 2004 aa13.25□□□□□ -0.29
HSPG2-206ENST00000439717 TRIP12Q14669 1992 aaPredicted RBP13.25□□□□□ -0.29
HSPG2-206ENST00000439717 POTEMA6NI47 508 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 C22orf31O95567 290 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 BMP15O95972 392 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 ACTN1P12814 892 aa13.24□□□□□ -0.29
HSPG2-206ENST00000439717 TMOD1P28289 359 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms