RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 TRPV2Q9Y5S1 764 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 CYP46A1Q9Y6A2 500 aa20.96■□□□□ 0.95
AC004540.1-201ENST00000439120 CCNE2O96020 404 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 IFNAR1P17181 557 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 PDIA3P30101 505 aaKnown RBP20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 KCNQ1P51787 676 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 TMEM62Q0P6H9 643 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 PTPROQ16827 1216 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 EPC2Q52LR7 807 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 PDXDC2PQ6P474 469 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 ABHD15Q6UXT9 468 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 CKAP2LQ8IYA6 745 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 FIBCD1Q8N539 461 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 UIMC1Q96RL1 719 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 NCOA5Q9HCD5 579 aaKnown RBP20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 ZNF302Q9NR11 478 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 TBC1D22BQ9NU19 505 aa20.95■□□□□ 0.94
AC004540.1-201ENST00000439120 COL4A6Q14031 1691 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 IGLV3-22A0A075B6J6 115 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 SMIM35A0A1B0GVV1 85 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 HBP1O60381 514 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 CD52P31358 61 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 PRR16Q569H4 304 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 MTHFD1LQ6UB35 978 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 ATP8B4Q8TF62 1192 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 CRYGNQ8WXF5 182 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 VPS54Q9P1Q0 977 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 SQORQ9Y6N5 450 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 NLRC5Q86WI3 1866 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 XIRP2A4UGR9 3374 aa20.94■□□□□ 0.94
AC004540.1-201ENST00000439120 IGKV6D-21A0A0A0MT36 114 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 CPLX1O14810 134 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 BMP1P13497 986 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 NLRP5P59047 1200 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 PAK2Q13177 524 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 NTRK3Q16288 839 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 ZNF746Q6NUN9 644 aaPredicted RBP20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 SWSAP1Q6NVH7 229 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 CCDC60Q8IWA6 550 aaPredicted RBP20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 TMEM192Q8IY95 271 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 NME8Q8N427 588 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 RASGRP4Q8TDF6 673 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 FTHL17Q9BXU8 183 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 ZSWIM6Q9HCJ5 1215 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 SAMM50Q9Y512 469 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 TCF20Q9UGU0 1960 aaKnown RBP20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 COL1A2P08123 1366 aa20.93■□□□□ 0.94
AC004540.1-201ENST00000439120 RALGAPA2Q2PPJ7 1873 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 ENPP3O14638 875 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 KLRC1P26715 233 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 CTNNB1P35222 781 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 EVCP57679 992 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 KRT76Q01546 638 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 SSRP1Q08945 709 aaKnown RBP20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 GPM6BQ13491 265 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 ZNF484Q5JVG2 852 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 CPLX2Q6PUV4 134 aaKnown RBP20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 SMAP1Q8IYB5 467 aaPredicted RBP20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 MRPL38Q96DV4 380 aaKnown RBP20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 CELF4Q9BZC1 486 aaKnown RBP20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 SH3GLB2Q9NR46 395 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 RWDD3Q9Y3V2 267 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 ADGRA3Q8IWK6 1321 aa20.92■□□□□ 0.94
AC004540.1-201ENST00000439120 H3BNC9 293 aa20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 ADAMTS3O15072 1205 aa20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 DHX15O43143 795 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 PSAPP07602 524 aa20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 AGO3Q9H9G7 860 aaKnown RBP20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 PADI3Q9ULW8 664 aa20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 GINS2Q9Y248 185 aa20.91■□□□□ 0.94
AC004540.1-201ENST00000439120 IGSF9BQ9UPX0 1349 aa20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 BTG3Q14201 252 aaPredicted RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 TIGD5Q53EQ6 642 aa20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 TRMT1LQ7Z2T5 733 aaKnown RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 BBXQ8WY36 941 aaPredicted RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 NECAB3Q96P71 396 aaPredicted RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 UPF3BQ9BZI7 483 aaKnown RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 PCDHA10Q9Y5I2 948 aa20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 MYH9P35579 1960 aaKnown RBP20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 LOXHD1Q8IVV2 1947 aa20.9■□□□□ 0.94
AC004540.1-201ENST00000439120 KDM3AQ9Y4C1 1321 aa20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 CIITAP33076 1130 aa20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 STK3Q13188 491 aa20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 ZNF274Q96GC6 653 aaPredicted RBP20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 C22orf23Q9BZE7 217 aa20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 UBE2ZQ9H832 354 aaPredicted RBP20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 TTC28Q96AY4 2481 aa20.89■□□□□ 0.93
AC004540.1-201ENST00000439120 WDR64B1ANS9 1081 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 DEXIO95424 95 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 STAG3L1P0CL83 205 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 USP11P51784 963 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 NFX1Q12986 1120 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 ODR4Q5SWX8 454 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 METTL13Q8N6R0 699 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 BANK1Q8NDB2 785 aa20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 LARP6Q9BRS8 491 aaKnown RBP20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 C11orf84Q9BUA3 381 aaPredicted RBP20.88■□□□□ 0.93
AC004540.1-201ENST00000439120 PDRG1Q9NUG6 133 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms