RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 RNF180Q86T96 592 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 LURAP1LQ8IV03 231 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 SLC44A2Q8IWA5 706 aaPredicted RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 CEP57L1Q8IYX8 460 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 AFAP1L2Q8N4X5 818 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 PNNQ9H307 717 aaKnown RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 DEF6Q9H4E7 631 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 STARD7Q9NQZ5 370 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 KLHL11Q9NVR0 708 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 SEPT10Q9P0V9 454 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 CNOT7Q9UIV1 285 aaKnown RBP6.18□□□□□ -1.42
RFC3-202ENST00000434425 LAMP5Q9UJQ1 280 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 PHTF1Q9UMS5 762 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 PCDHB11Q9Y5F2 797 aa6.18□□□□□ -1.42
RFC3-202ENST00000434425 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 SYNDIG1LA6NDD5 238 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 YDJCA8MPS7 323 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 MASP2O00187 686 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 ABCC4O15439 1325 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 ZBTB24O43167 697 aaPredicted RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 MYO1BO43795 1136 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 KINO60870 393 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 MBD4O95243 580 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 STAU1O95793 577 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 IFIT1P09914 478 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 XPAP23025 273 aaPredicted RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 GNA15P30679 374 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 SCTRP47872 440 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 HUNKP57058 714 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 EIF4A1P60842 406 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 ZBTB17Q13105 803 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 CNGA3Q16281 694 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 INF2Q27J81 1249 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 KIF4BQ2VIQ3 1234 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 VPS53Q5VIR6 699 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 CCDC102BQ68D86 513 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 C1orf228Q6PIY5 440 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 KIF6Q6ZMV9 814 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 ARHGEF18Q6ZSZ5 1173 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 RAPH1Q70E73 1250 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 NLRP14Q86W24 1093 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 NCAPG2Q86XI2 1143 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 TRIM50Q86XT4 487 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 TRMT44Q8IYL2 757 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 CCAR2Q8N163 923 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 SUN5Q8TC36 379 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 KIAA1524Q8TCG1 905 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 DLG5Q8TDM6 1919 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 STON2Q8WXE9 905 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 MFSD3Q96ES6 412 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 DHTKD1Q96HY7 919 aaPredicted RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 CITED4Q96RK1 184 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 THUMPD2Q9BTF0 503 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 PI4K2AQ9BTU6 479 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 LSM14BQ9BX40 385 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 SEMA4AQ9H3S1 761 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 OSBPL3Q9H4L5 887 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 TBC1D7Q9P0N9 293 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 CEP72Q9P209 647 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 AKAP11Q9UKA4 1901 aa6.17□□□□□ -1.42
RFC3-202ENST00000434425 LRRFIP2Q9Y608 721 aaKnown RBP6.17□□□□□ -1.42
RFC3-202ENST00000434425 RIC1Q4ADV7 1423 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 SERTM1A2A2V5 107 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 KIF2AO00139 706 aaPredicted RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 TADA3O75528 432 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 EGFRP00533 1210 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 PARP1P09874 1014 aaKnown RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 ATP6V1B1P15313 513 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 MZF1P28698 734 aaPredicted RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 SOX5P35711 763 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 KRT20P35900 424 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 MTHFRP42898 656 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 ATP1A2P50993 1020 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 PDE6CP51160 858 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 SOX10P56693 466 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 PLCB3Q01970 1234 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 CYP4A11Q02928 519 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 TRIM32Q13049 653 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 TRAF1Q13077 416 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 NOGQ13253 232 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 LAPTM5Q13571 262 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 MTMR1Q13613 665 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 GBX1Q14549 363 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 PLCB4Q15147 1175 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 SAFBQ15424 915 aaKnown RBP eCLIP6.16□□□□□ -1.42
RFC3-202ENST00000434425 TNNI3KQ59H18 835 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 GPATCH4Q5T3I0 446 aaKnown RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 TTC19Q6DKK2 380 aaPredicted RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 LLGL2Q6P1M3 1020 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 XRRA1Q6P2D8 792 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 BTNL9Q6UXG8 535 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 DPP8Q6V1X1 898 aaPredicted RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 PPP1R42Q7Z4L9 355 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 SP8Q8IXZ3 490 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 CCDC116Q8IYX3 515 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 CBARPQ8N350 705 aaPredicted RBP6.16□□□□□ -1.42
RFC3-202ENST00000434425 DCLK2Q8N568 766 aa6.16□□□□□ -1.42
RFC3-202ENST00000434425 NAT8LQ8N9F0 302 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms