RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 BAIAP3O94812 1187 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 STBD1O95210 358 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 GHRP10912 638 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 KLRC1P26715 233 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 IKBKEQ14164 716 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 LPIN1Q14693 890 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 ANKRD1Q15327 319 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 Q4G0T1 1027 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 PDXDC2PQ6P474 469 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 CPLX2Q6PUV4 134 aaKnown RBP14.44□□□□□ -0.1
GPC1-204ENST00000426280 MTHFD1LQ6UB35 978 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 B3GNT9Q6UX72 402 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 RPAINQ86UA6 219 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 RTN4RL1Q86UN2 441 aaPredicted RBP14.44□□□□□ -0.1
GPC1-204ENST00000426280 SLC9A7Q96T83 725 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 SLC28A3Q9HAS3 691 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 PRDM6Q9NQX0 595 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 TBC1D22BQ9NU19 505 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 GABBR1Q9UBS5 961 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 CDY2AQ9Y6F7 541 aa14.44□□□□□ -0.1
GPC1-204ENST00000426280 TMEM150BA6NC51 233 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 CHMP2AO43633 222 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 PARNO95453 639 aaKnown RBP14.43□□□□□ -0.1
GPC1-204ENST00000426280 FOSL2P15408 326 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 SETQ01105 290 aaPredicted RBP14.43□□□□□ -0.1
GPC1-204ENST00000426280 KRT40Q6A162 431 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 ZNF746Q6NUN9 644 aaPredicted RBP14.43□□□□□ -0.1
GPC1-204ENST00000426280 MIS18BP1Q6P0N0 1132 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 PIK3AP1Q6ZUJ8 805 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 ETNPPLQ8TBG4 499 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 ATP8B4Q8TF62 1192 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 PCDHA2Q9Y5H9 948 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 PCDHA10Q9Y5I2 948 aa14.43□□□□□ -0.1
GPC1-204ENST00000426280 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 BTBD18B2RXH4 712 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 EML1O00423 815 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 CDKL5O76039 1030 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 NONOQ15233 471 aaKnown RBP eCLIP14.42□□□□□ -0.1
GPC1-204ENST00000426280 LETM2Q2VYF4 491 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 PPP2R2DQ66LE6 453 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 GALNT17Q6IS24 598 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 TAF2Q6P1X5 1199 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 KRT25Q7Z3Z0 450 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 CCDC83Q8IWF9 413 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 KIAA0319LQ8IZA0 1049 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 SLC17A8Q8NDX2 589 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 MAFAQ8NHW3 353 aaPredicted RBP14.42□□□□□ -0.1
GPC1-204ENST00000426280 LINC01599Q8WXQ3 324 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 SH2D3AQ9BRG2 576 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 DISC1Q9NRI5 854 aa14.42□□□□□ -0.1
GPC1-204ENST00000426280 TLL1O43897 1013 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 HBP1O60381 514 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 CAND2O75155 1236 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 GJB5O95377 273 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 C22orf31O95567 290 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 PSAPP07602 524 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 KCNJ6P48051 423 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 MRPS6P82932 125 aaKnown RBP14.41□□□□□ -0.1
GPC1-204ENST00000426280 KRT76Q01546 638 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 GUCY1B3Q02153 619 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 TMEM40Q8WWA1 233 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 PPM1EQ8WY54 764 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 SEPT8Q92599 483 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 HAS1Q92839 578 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 PPP1R16BQ96T49 567 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 RIT2Q99578 217 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 CDH23Q9H251 3354 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 IGSF9BQ9UPX0 1349 aa14.41□□□□□ -0.1
GPC1-204ENST00000426280 SMIM35A0A1B0GVV1 85 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 ENPP3O14638 875 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 LPXNO60711 386 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 GAS7O60861 476 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 UPP2O95045 317 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 CD2BP2O95400 341 aaKnown RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 CD52P31358 61 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 RABEP1Q15276 862 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 CCDC85BQ15834 202 aaPredicted RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 FAM160B1Q5W0V3 765 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 SMAP1Q8IYB5 467 aaPredicted RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 MYOCDQ8IZQ8 938 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 ZNF668Q96K58 619 aaPredicted RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 CEP89Q96ST8 783 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 IFIH1Q9BYX4 1025 aaKnown RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 CELF4Q9BZC1 486 aaKnown RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 DDX25Q9UHL0 483 aaKnown RBP14.4□□□□□ -0.1
GPC1-204ENST00000426280 VAV3Q9UKW4 847 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 SAMM50Q9Y512 469 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 EYSQ5T1H1 3165 aa14.4□□□□□ -0.1
GPC1-204ENST00000426280 CHD7Q9P2D1 2997 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 CCDC194A0A1B0GVG4 234 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 IGFBP4P22692 258 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 SLC26A2P50443 739 aa14.39□□□□□ -0.11
GPC1-204ENST00000426280 ZNF484Q5JVG2 852 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms