RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 RC3H2Q9HBD1 1191 aaKnown RBP18.4■□□□□ 0.54
COL18A1-205ENST00000423214 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
COL18A1-205ENST00000423214 CLDND1Q9NY35 253 aa18.4■□□□□ 0.54
COL18A1-205ENST00000423214 SQORQ9Y6N5 450 aa18.4■□□□□ 0.54
COL18A1-205ENST00000423214 HMGB1P09429 215 aaKnown RBP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 BMPR1AP36894 532 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 PLA2G5P39877 138 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 METAP2P50579 478 aaKnown RBP eCLIP18.39■□□□□ 0.531e-6■■□□□ 11.4
COL18A1-205ENST00000423214 RCAN1P53805 252 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 FUT2Q10981 343 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 ITGB3BPQ13352 177 aaPredicted RBP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 ADCK5Q3MIX3 580 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 NPAS4Q8IUM7 802 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 GJD3Q8N144 294 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 NEK9Q8TD19 979 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 KHSRPQ92945 711 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 CLP1Q92989 425 aaKnown RBP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 FAM122AQ96E09 287 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 LRFN3Q9BTN0 628 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 AGO3Q9H9G7 860 aaKnown RBP18.39■□□□□ 0.53
COL18A1-205ENST00000423214 TMEM260Q9NX78 707 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 TCEAL9Q9UHQ7 104 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 PCDHA2Q9Y5H9 948 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 IGSF9BQ9UPX0 1349 aa18.39■□□□□ 0.53
COL18A1-205ENST00000423214 CCDC196A0A1B0GTZ2 297 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 SMIM35A0A1B0GVV1 85 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 GRXCR2A6NFK2 248 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 NCK2O43639 380 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 STAG3L1P0CL83 205 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 CLK2P49760 499 aaKnown RBP18.38■□□□□ 0.53
COL18A1-205ENST00000423214 NIPA1Q7RTP0 329 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 LINC01599Q8WXQ3 324 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 ZNF689Q96CS4 500 aaPredicted RBP18.38■□□□□ 0.53
COL18A1-205ENST00000423214 CD320Q9NPF0 282 aa18.38■□□□□ 0.53
COL18A1-205ENST00000423214 FAM86C2PA6NEL3 165 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 MEIS1O00470 390 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 GRM6O15303 877 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 DGKIO75912 1065 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 MMP1P03956 469 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 SCG2P13521 617 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 IBSPP21815 317 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-205ENST00000423214 CDC27P30260 824 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 KRT76Q01546 638 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 TSGA10IPQ3SY00 556 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 PAN2Q504Q3 1202 aaKnown RBP18.37■□□□□ 0.53
COL18A1-205ENST00000423214 JAKMIP3Q5VZ66 844 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 MTHFD1LQ6UB35 978 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 CMTR2Q8IYT2 770 aaKnown RBP18.37■□□□□ 0.53
COL18A1-205ENST00000423214 RASEFQ8IZ41 740 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 CCDC12Q8WUD4 166 aaPredicted RBP18.37■□□□□ 0.53
COL18A1-205ENST00000423214 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 PLVAPQ9BX97 442 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 CELF4Q9BZC1 486 aaKnown RBP18.37■□□□□ 0.53
COL18A1-205ENST00000423214 LRFN2Q9ULH4 789 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 PADI3Q9ULW8 664 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 COL1A2P08123 1366 aa18.37■□□□□ 0.53
COL18A1-205ENST00000423214 HBP1O60381 514 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 LINC00271P0C7V0 271 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 SETQ01105 290 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-205ENST00000423214 PFKFB3Q16875 520 aaPredicted RBP18.36■□□□□ 0.53
COL18A1-205ENST00000423214 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 PDXDC2PQ6P474 469 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 NME8Q8N427 588 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 PPP2R3CQ969Q6 453 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 ZNF302Q9NR11 478 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 KDM3AQ9Y4C1 1321 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 MRPL42Q9Y6G3 142 aaKnown RBP18.36■□□□□ 0.53
COL18A1-205ENST00000423214 C5orf42Q9H799 3197 aa18.36■□□□□ 0.53
COL18A1-205ENST00000423214 PI4K2BG5E9Z4 385 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 GPR37L1O60883 481 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 ATG7O95352 703 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 CCNE2O96020 404 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 APOBRQ0VD83 1088 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 COL19A1Q14993 1142 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 CCDC60Q8IWA6 550 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-205ENST00000423214 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
COL18A1-205ENST00000423214 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 P2RX5Q93086 422 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 C6orf50Q9HD87 102 aa18.35■□□□□ 0.53
COL18A1-205ENST00000423214 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
COL18A1-205ENST00000423214 IGKV6D-21A0A0A0MT36 114 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 ESYT2A0FGR8 921 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 FAM86B1E9PN63 330 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
COL18A1-205ENST00000423214 FAM86B2P0C5J1 330 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 KLRC1P26715 233 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 HYAL1Q12794 435 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 NFX1Q12986 1120 aaKnown RBP18.34■□□□□ 0.53
COL18A1-205ENST00000423214 CLUL1Q15846 466 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 TMEM266Q2M3C6 531 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 JAKMIP1Q96N16 626 aaKnown RBP18.34■□□□□ 0.53
COL18A1-205ENST00000423214 ZNF577Q9BSK1 485 aa18.34■□□□□ 0.53
COL18A1-205ENST00000423214 ALG13Q9NP73 1137 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms