RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 DKC1O60832 514 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDGFA-204ENST00000405692 RSPH10BP0C881 870 aa23.44■■□□□ 1.34
PDGFA-204ENST00000405692 U2AF2P26368 475 aaKnown RBP eCLIP23.44■■□□□ 1.34
PDGFA-204ENST00000405692 ZNF618Q5T7W0 954 aa23.44■■□□□ 1.34
PDGFA-204ENST00000405692 HERVK_113Q902F9 699 aa23.44■■□□□ 1.34
PDGFA-204ENST00000405692 HAS1Q92839 578 aa23.44■■□□□ 1.34
PDGFA-204ENST00000405692 ATP2B1P20020 1258 aa23.43■■□□□ 1.34
PDGFA-204ENST00000405692 FXR1P51114 621 aaKnown RBP eCLIP23.43■■□□□ 1.34
PDGFA-204ENST00000405692 MARCH8Q5T0T0 291 aa23.43■■□□□ 1.34
PDGFA-204ENST00000405692 WNT8BQ93098 351 aa23.43■■□□□ 1.34
PDGFA-204ENST00000405692 PCDHA12Q9UN75 941 aa23.43■■□□□ 1.34
PDGFA-204ENST00000405692 K7ELQ4 463 aaPredicted RBP23.42■■□□□ 1.34
PDGFA-204ENST00000405692 MCM7P33993 719 aa23.42■■□□□ 1.34
PDGFA-204ENST00000405692 LARP1BQ659C4 914 aaKnown RBP23.42■■□□□ 1.34
PDGFA-204ENST00000405692 MCTP1Q6DN14 999 aa23.42■■□□□ 1.34
PDGFA-204ENST00000405692 VAV3Q9UKW4 847 aa23.42■■□□□ 1.34
PDGFA-204ENST00000405692 PCDHA2Q9Y5H9 948 aa23.42■■□□□ 1.34
PDGFA-204ENST00000405692 OATP04181 439 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 ATP4AP20648 1035 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 PDCP20941 246 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 MTHFD1LQ6UB35 978 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 OTOP2Q7RTS6 562 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 SNX21Q969T3 373 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 INTS4Q96HW7 963 aaKnown RBP23.41■■□□□ 1.34
PDGFA-204ENST00000405692 KAT6AQ92794 2004 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 TANC1Q9C0D5 1861 aa23.41■■□□□ 1.34
PDGFA-204ENST00000405692 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.4■■□□□ 1.34
PDGFA-204ENST00000405692 SMIM35A0A1B0GVV1 85 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.4■■□□□ 1.34
PDGFA-204ENST00000405692 CXCL10P02778 98 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 KLRC1P26715 233 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 PSMC5P62195 406 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 PRKCEQ02156 737 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 EPHA7Q15375 998 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 FAM26DQ5JW98 314 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 TTC38Q5R3I4 469 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 RASIP1Q5U651 963 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 GPR153Q6NV75 609 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 NME8Q8N427 588 aa23.4■■□□□ 1.34
PDGFA-204ENST00000405692 TRIOBPQ9H2D6 2365 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 KIF28PB7ZC32 967 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 M0QZ92 97 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 MAGEB2O15479 319 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 BAIAP3O94812 1187 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 P4HBP07237 508 aaKnown RBP23.39■■□□□ 1.33
PDGFA-204ENST00000405692 QARSP47897 775 aaKnown RBP23.39■■□□□ 1.33
PDGFA-204ENST00000405692 SMAD3P84022 425 aaKnown RBP23.39■■□□□ 1.33
PDGFA-204ENST00000405692 XKR3Q5GH77 459 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 IER5Q5VY09 327 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 NCAPH2Q6IBW4 605 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 CNKSR3Q6P9H4 555 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 TRAF7Q6Q0C0 670 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 RUFY4Q6ZNE9 571 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 TRMT1LQ7Z2T5 733 aaKnown RBP23.39■■□□□ 1.33
PDGFA-204ENST00000405692 HSCBQ8IWL3 235 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 TRAPPC12Q8WVT3 735 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 DNAJB3Q8WWF6 145 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 MTMR9Q96QG7 549 aa23.39■■□□□ 1.33
PDGFA-204ENST00000405692 TTC12Q9H892 705 aaPredicted RBP23.39■■□□□ 1.33
PDGFA-204ENST00000405692 TRIP12Q14669 1992 aaPredicted RBP23.38■■□□□ 1.33
PDGFA-204ENST00000405692 ZBBXA8MT70 800 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 ZNF862O60290 1169 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 NBNO60934 754 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 EFCAB14O75071 495 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 CTSHP09668 335 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 TXKP42681 527 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 ZNF174Q15697 407 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 FAM49AQ9H0Q0 323 aaPredicted RBP23.38■■□□□ 1.33
PDGFA-204ENST00000405692 SLC4A7Q9Y6M7 1214 aa23.38■■□□□ 1.33
PDGFA-204ENST00000405692 EML1O00423 815 aa23.37■■□□□ 1.33
PDGFA-204ENST00000405692 UGCGQ16739 394 aa23.37■■□□□ 1.33
PDGFA-204ENST00000405692 RILPL1Q5EBL4 403 aa23.37■■□□□ 1.33
PDGFA-204ENST00000405692 BANK1Q8NDB2 785 aa23.37■■□□□ 1.33
PDGFA-204ENST00000405692 VWCEQ96DN2 955 aa23.37■■□□□ 1.33
PDGFA-204ENST00000405692 ZBTB42B2RXF5 422 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 SOX1O00570 391 aaPredicted RBP23.36■■□□□ 1.33
PDGFA-204ENST00000405692 WNT7AO00755 349 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 OR52Z1P0C646 297 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 TMOD1P28289 359 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 MRPS6P82932 125 aaKnown RBP23.36■■□□□ 1.33
PDGFA-204ENST00000405692 SPIRE1Q08AE8 756 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 IKBKEQ14164 716 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 GPNMBQ14956 572 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 NEK9Q8TD19 979 aa23.36■■□□□ 1.33
PDGFA-204ENST00000405692 NIFKQ9BYG3 293 aaKnown RBP23.36■■□□□ 1.33
PDGFA-204ENST00000405692 SEPT9Q9UHD8 586 aaPredicted RBP23.36■■□□□ 1.33
PDGFA-204ENST00000405692 MYH9P35579 1960 aaKnown RBP23.36■■□□□ 1.33
PDGFA-204ENST00000405692 ABHD14A-ACY1A0A1B0GW23 586 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 C22orf31O95567 290 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 KCNJ6P48051 423 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 MBTPS1Q14703 1052 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 TMEM266Q2M3C6 531 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 ZNF710Q8N1W2 664 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 METTL13Q8N6R0 699 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 SEPT8Q92599 483 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 APBB2Q92870 758 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 LRCH3Q96II8 777 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 TMEM60Q9H2L4 133 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 ZSWIM4Q9H7M6 989 aa23.35■■□□□ 1.33
PDGFA-204ENST00000405692 PPME1Q9Y570 386 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms